Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TCRBV3S1A0A5B6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
TCRBV3S1A0A5B6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 RNU4-52P-201ENST00000384209 138 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 SNORA67.4-201ENST00000384688 142 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AL590290.1-201ENST00000405336 380 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 RNU4-65P-201ENST00000410473 140 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 NANOGP5-201ENST00000424456 877 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC019097.1-201ENST00000424783 735 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC000041.1-201ENST00000439655 175 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 UBE2V2P4-201ENST00000447495 259 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 RNU7-27P-201ENST00000459281 62 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 RNA5SP468-201ENST00000516782 93 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC012213.4-201ENST00000606457 354 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC008083.4-201ENST00000615076 444 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC007342.8-201ENST00000623278 678 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC119674.1-212ENST00000641155 993 ntBASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.04□□□□□ -2.08
TCRBV3S1A0A5B6 AC026241.1-201ENST00000517873 2142 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 MTCO1P24-201ENST00000515438 1558 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 MTCO1P39-201ENST00000426148 480 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 SRIP2-201ENST00000428470 166 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC092427.1-202ENST00000430569 476 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC023347.2-201ENST00000433994 462 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 SNRPEP4-201ENST00000435815 279 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC107083.1-201ENST00000439643 279 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 RPS3P1-201ENST00000456781 192 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 RNA5SP24-201ENST00000516478 95 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 RN7SKP40-201ENST00000517211 242 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 MTCYBP20-201ENST00000524239 1129 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC109635.4-202ENST00000531666 412 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 LRRC37A5P-203ENST00000580181 585 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 OR4K7P-201ENST00000580232 945 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 MIR6075-201ENST00000620782 95 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 AC103798.2-201ENST00000624292 632 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 MIR4496-201ENST00000635896 61 ntBASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.03□□□□□ -2.08
TCRBV3S1A0A5B6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
TCRBV3S1A0A5B6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AL365361.1-201ENST00000566942 3481 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 OR5J1P-201ENST00000313544 939 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 RN7SKP27-201ENST00000410684 333 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AC063976.3-201ENST00000426849 329 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 MTND2P8-201ENST00000450555 1025 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 TPMTP4-201ENST00000450749 678 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AC008716.1-201ENST00000511084 513 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 RNU1-104P-201ENST00000517280 175 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 HMGB1P23-201ENST00000518743 568 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AC008083.2-201ENST00000546707 476 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 VN1R92P-201ENST00000598511 928 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AL020997.2-201ENST00000602607 184 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 SRGNP1-201ENST00000603392 451 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AC055764.2-201ENST00000610089 670 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AL590282.1-201ENST00000610379 1136 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AC006329.2-201ENST00000611491 394 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AL110115.1-201ENST00000614396 364 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AP003072.5-201ENST00000623872 773 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 AL137790.1-201ENST00000634283 177 ntBASIC2.02□□□□□ -2.09
TCRBV3S1A0A5B6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms