Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 RNA5SP383-201ENST00000362934 120 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 RN7SKP227-201ENST00000364445 330 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 U8.11-201ENST00000384699 133 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 U8.12-201ENST00000384701 133 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 SNORA40.2-201ENST00000390847 128 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 RNA5SP293-201ENST00000410527 113 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 RN7SKP263-201ENST00000411194 309 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 RPL7P46-201ENST00000425129 740 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 NDUFB4P6-201ENST00000436819 366 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 FTH1P1-201ENST00000437933 532 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 THAP5P1-201ENST00000439089 262 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL592447.1-201ENST00000447592 540 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 U8.18-201ENST00000459285 133 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC104472.2-201ENST00000469035 601 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC023598.1-201ENST00000472521 361 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 RPL32P34-201ENST00000486380 400 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC111000.2-201ENST00000507775 550 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 HMGN1P11-201ENST00000508668 303 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC113347.3-201ENST00000509113 148 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 MIR2276-201ENST00000516886 89 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC069304.2-201ENST00000605154 435 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL158163.2-201ENST00000619110 700 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AP002371.2-201ENST00000624450 503 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC068724.3-201ENST00000625906 87 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC106858.1-201ENST00000637497 429 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 ZNF542P-204ENST00000482727 1305 ntBASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF103-CHMP3A0A140T963 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL356473.1-201ENST00000406203 1408 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 DEFB108F-201ENST00000344638 222 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 RNA5SP51-201ENST00000364750 119 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 RAB28P1-201ENST00000411517 641 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 CDC27P1-201ENST00000445384 715 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 SETP14-201ENST00000497538 873 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 MTCYBP17-201ENST00000503579 789 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC114967.1-201ENST00000504890 259 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 SNORA70.18-201ENST00000516696 98 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 DEFB108D-201ENST00000527787 222 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC037471.2-201ENST00000564941 598 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 MTND3P13-201ENST00000574391 343 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC011260.1-201ENST00000578420 472 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC092628.2-201ENST00000622492 339 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL138960.2-201ENST00000625145 535 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC004972.1-201ENST00000623934 2209 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 MAPK10-362ENST00000641864 4484 ntBASIC3.31□□□□□ -1.88
RNF103-CHMP3A0A140T963 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC103988.1-201ENST00000566382 2177 ntBASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 SNORD9-201ENST00000362566 104 ntBASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 Y_RNA.408-201ENST00000383987 102 ntBASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 RNA5SP252-201ENST00000391131 119 ntBASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL031679.1-201ENST00000400616 525 ntBASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC068533.2-201ENST00000411872 306 ntBASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 ATP5A1P2-201ENST00000412323 255 ntBASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms