Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC003982.1-202ENST00000469928 248 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AP001025.2-201ENST00000490908 477 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC104057.1-201ENST00000515547 497 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 SNORA74D-201ENST00000516404 141 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 HSPE1P20-201ENST00000538133 289 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 HPRT1P3-201ENST00000539521 576 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC060766.3-201ENST00000591442 263 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AL442067.2-201ENST00000614033 363 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC024341.1-201ENST00000526444 1552 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AL645568.2-201ENST00000432815 1337 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 RNA5SP27-201ENST00000363839 119 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 RPS3AP26-201ENST00000398259 784 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 RN7SKP220-201ENST00000410611 288 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 ARL2BPP3-201ENST00000421226 480 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 RPL23AP74-201ENST00000437246 471 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 FABP5P3-201ENST00000437960 408 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 DSTNP2-201ENST00000504533 515 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 MTCO3P44-201ENST00000510977 541 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC093014.1-201ENST00000548926 724 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC025918.2-201ENST00000558683 763 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AL606834.2-201ENST00000602954 668 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC025588.3-201ENST00000604182 274 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AL160281.1-201ENST00000605307 311 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC008962.1-201ENST00000605729 304 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC013468.1-201ENST00000608680 598 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 VIS1.1-201ENST00000610517 203 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC016911.1-201ENST00000613297 452 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AL110115.1-201ENST00000614396 364 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC022509.4-201ENST00000621404 572 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC090897.3-201ENST00000636973 1157 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 AC092593.1-201ENST00000515413 1815 ntBASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
USH1CQ9Y6N9 OR5BR1P-201ENST00000524992 1330 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AL136520.1-201ENST00000600311 1322 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 RNU6-1151P-201ENST00000384684 107 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 RNU6-1077P-201ENST00000410506 102 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 PNRC2P1-201ENST00000423940 420 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC005300.1-201ENST00000428401 373 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 CABYRP1-201ENST00000465493 1045 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 HMGB1P25-201ENST00000468402 607 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AL136126.1-201ENST00000473603 402 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC104108.1-201ENST00000509930 412 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 SNORA31.15-201ENST00000516771 132 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC012254.4-201ENST00000588843 273 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC091057.2-201ENST00000602594 792 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC073387.2-201ENST00000604797 784 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC135178.6-201ENST00000605314 398 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 RPL23AP88-201ENST00000605759 454 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 BX322635.1-201ENST00000605804 496 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 BX664608.1-201ENST00000610519 487 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 AC004696.1-201ENST00000614345 607 ntBASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.78□□□□□ -1.96
USH1CQ9Y6N9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.78□□□□□ -1.97
USH1CQ9Y6N9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
USH1CQ9Y6N9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.77□□□□□ -1.97
USH1CQ9Y6N9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
USH1CQ9Y6N9 RNA5SP258-201ENST00000362750 119 ntBASIC2.77□□□□□ -1.97
USH1CQ9Y6N9 SNORA38.1-201ENST00000364172 131 ntBASIC2.77□□□□□ -1.97
USH1CQ9Y6N9 RNU6-444P-201ENST00000383988 108 ntBASIC2.77□□□□□ -1.97
USH1CQ9Y6N9 RNU6-339P-201ENST00000384310 107 ntBASIC2.77□□□□□ -1.97
USH1CQ9Y6N9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms