Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC126177.3-201ENST00000551839 688 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 HSPE1P3-201ENST00000559254 309 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AL450336.1-201ENST00000605180 586 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AL355810.1-201ENST00000614629 552 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AF117829.1-206ENST00000621883 3802 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC068787.1-201ENST00000623908 691 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC120349.2-201ENST00000625002 298 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 U6.101-201ENST00000637707 76 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC007256.1-201ENST00000392253 2765 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 MIR423-201ENST00000362201 94 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-1074P-201ENST00000383995 104 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AL590084.1-201ENST00000407885 387 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AL450338.1-201ENST00000407987 512 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 RNA5SP80-201ENST00000410475 111 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 SSR1P2-201ENST00000415208 787 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 RPL21P32-201ENST00000419877 477 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 NEK4P1-201ENST00000433383 879 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 Z80107.1-201ENST00000436830 412 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AF228730.2-201ENST00000438784 848 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 BX510359.1-201ENST00000456973 237 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 U3.44-201ENST00000458938 192 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 KLHL2P1-201ENST00000508691 521 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC010198.2-201ENST00000550612 259 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 NCAPGP2-201ENST00000557911 754 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC090695.1-201ENST00000561269 1222 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 MIR4637-201ENST00000582405 84 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC006254.3-201ENST00000603353 884 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC107075.1-201ENST00000613695 314 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AL355365.1-201ENST00000616480 294 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AL591424.2-201ENST00000617023 128 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 AC005858.4-201ENST00000623191 700 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PCDHGA1Q9Y5H4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-173P-201ENST00000364215 104 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU1-33P-201ENST00000364249 162 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 ANAPC10P1-201ENST00000395991 556 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 RN7SKP56-201ENST00000410513 331 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 GLRXP1-201ENST00000423261 334 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 MTCYBP34-201ENST00000439552 670 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 MTND2P20-201ENST00000440805 661 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 RPL39P6-201ENST00000448289 150 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 OFD1P3Y-201ENST00000453312 783 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 RBMY2UP-201ENST00000453474 324 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 MTCO3P11-201ENST00000455103 774 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AC012181.1-201ENST00000479895 423 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 ACTG1P13-201ENST00000486987 1043 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AC108729.1-201ENST00000487812 947 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AC114981.1-201ENST00000503897 678 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-311P-201ENST00000516224 102 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 SNORA31.8-201ENST00000516327 108 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 RPL12P22-201ENST00000519073 490 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AC007458.1-201ENST00000542812 373 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 HIGD1AP17-201ENST00000554576 276 ntBASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDHGA1Q9Y5H4 AC069304.2-201ENST00000605154 435 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms