Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL589880.1-201ENST00000448271 287 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 TRGVB-201ENST00000453257 471 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 OFD1P3Y-201ENST00000453312 783 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AP001992.1-205ENST00000462248 379 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC093278.1-201ENST00000494700 600 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 ARL4AP2-201ENST00000507378 601 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC015917.1-201ENST00000579654 510 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC012443.1-201ENST00000605605 231 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC080013.4-201ENST00000607624 649 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC106028.5-201ENST00000610332 395 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 MIR7851-201ENST00000610611 160 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC025588.4-201ENST00000615802 908 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC090617.7-201ENST00000623952 126 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC109315.1-201ENST00000584143 1347 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 TAB3P1-202ENST00000452645 1634 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC097714.1-201ENST00000511272 1647 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AP002907.1-201ENST00000606361 1430 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AL513185.3-201ENST00000433335 1300 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 RNU6-882P-201ENST00000391025 103 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 RPL32P23-201ENST00000397237 405 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 HSPE1P1-201ENST00000421494 318 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC007742.1-201ENST00000425789 329 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 ELOCP26-201ENST00000436067 329 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 HMGB3P6-201ENST00000444896 598 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC114755.5-201ENST00000447760 831 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 HMGN2P13-201ENST00000476476 274 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC108734.3-201ENST00000481241 1165 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC090453.1-201ENST00000495560 436 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 RNU6-56P-201ENST00000516986 93 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 SLC2A13P1-201ENST00000531560 322 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC024224.1-201ENST00000538284 609 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 CR383656.7-201ENST00000548164 174 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 SETP2-201ENST00000553886 926 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 BNIP3P5-201ENST00000562290 498 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AP005205.1-201ENST00000563503 508 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC006116.10-201ENST00000591836 581 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC022916.3-201ENST00000592961 742 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 VN1R83P-201ENST00000595685 445 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC096947.1-201ENST00000603233 470 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AL022099.1-201ENST00000604551 712 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC106900.2-201ENST00000604994 317 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC008962.1-201ENST00000605729 304 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 MIR6716-201ENST00000613413 80 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 SNORD39.4-201ENST00000620099 78 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC084824.4-201ENST00000620106 731 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AL356321.1-201ENST00000621360 228 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 U4.6-201ENST00000621618 127 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AL049777.1-201ENST00000622740 518 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 MAPK10-322ENST00000641485 4530 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 AC103988.1-201ENST00000566382 2177 ntBASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.8□□□□□ -1.96
KCNIP3Q9Y2W7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.79□□□□□ -1.96
KCNIP3Q9Y2W7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms