Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AC020914.6-201ENST00000594327 272 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AL596327.1-201ENST00000603629 213 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AL159169.3-201ENST00000608871 561 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK11AQ9UQ88 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK11AQ9UQ88 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK11AQ9UQ88 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK11AQ9UQ88 RPL21P132-201ENST00000331267 462 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 Y_RNA.51-201ENST00000362725 102 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 RNU4-24P-201ENST00000364565 139 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 RNU6-837P-201ENST00000391056 108 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC093698.1-201ENST00000423843 571 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AP000907.1-201ENST00000428428 510 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 ELOCP18-201ENST00000434209 337 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 HMGB1P37-201ENST00000439613 609 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC092757.1-201ENST00000467293 467 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 OR5H5P-201ENST00000503164 928 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC104619.4-201ENST00000510773 249 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC026412.2-201ENST00000512270 1075 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 Y_RNA.655-201ENST00000515919 96 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 RN7SKP18-201ENST00000516005 275 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AL389895.1-201ENST00000554127 252 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC025588.3-201ENST00000604182 274 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC243773.3-201ENST00000613270 256 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AL158063.1-201ENST00000615349 536 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC6□□□□□ -1.45
CDK11AQ9UQ88 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK11AQ9UQ88 AC095050.2-201ENST00000510748 1458 ntBASIC6□□□□□ -1.45
CDK11AQ9UQ88 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK11AQ9UQ88 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK11AQ9UQ88 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 AC073346.2-201ENST00000624724 2058 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 SNORA7.2-201ENST00000364446 145 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 RNU6-335P-201ENST00000364563 113 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 Y_RNA.302-201ENST00000364997 102 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 RHOT1P2-201ENST00000366423 333 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 RNU6-339P-201ENST00000384310 107 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 MIR513A2-201ENST00000385249 127 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 RNA5SP104-201ENST00000410989 118 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 NPM1P11-201ENST00000417106 855 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 UBE2FP3-201ENST00000436366 524 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 MTCO2P16-201ENST00000436962 677 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 RANP8-201ENST00000444720 713 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 NPM1P49-201ENST00000448027 714 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 snoU13.3-201ENST00000459441 104 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 RN7SL585P-201ENST00000470538 280 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 SETP11-201ENST00000473027 690 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 RN7SL293P-201ENST00000481765 281 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 MTCYBP17-201ENST00000503579 789 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 DEFB131D-201ENST00000526803 184 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 SNRPGP15-201ENST00000600149 222 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 AL355812.1-201ENST00000603215 216 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 MTCYBP22-201ENST00000603788 447 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 RNU1-30P-201ENST00000606575 163 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 AC024560.3-201ENST00000608482 349 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 MIR7844-201ENST00000616161 122 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 AC091953.5-201ENST00000622919 233 ntBASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK11AQ9UQ88 MTND5P24-201ENST00000438892 1767 ntBASIC5.98□□□□□ -1.45
CDK11AQ9UQ88 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CDK11AQ9UQ88 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDK11AQ9UQ88 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC5.98□□□□□ -1.45
CDK11AQ9UQ88 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.98□□□□□ -1.45
CDK11AQ9UQ88 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDK11AQ9UQ88 SNORA31-201ENST00000362607 130 ntBASIC5.98□□□□□ -1.45
CDK11AQ9UQ88 RNA5SP88-201ENST00000365560 109 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms