Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SNORD116-11-201ENST00000383882 92 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 PDSS1P1-201ENST00000422953 1114 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 RSL24D1P6-201ENST00000426934 401 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AC092162.1-201ENST00000432828 434 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AL451139.1-201ENST00000434718 346 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 MTND2P29-201ENST00000438595 412 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 RN7SL188P-201ENST00000469842 285 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 BNIP3P5-201ENST00000562290 498 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AC123768.4-201ENST00000616244 701 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AC109446.4-201ENST00000623235 2755 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AL136313.1-201ENST00000624804 202 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 API5P2-201ENST00000397055 1498 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 AL359955.1-201ENST00000455242 3275 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 MTND5P30-201ENST00000452896 1731 ntBASIC6.54□□□□□ -1.36
ZC3H4Q9UPT8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-511P-201ENST00000363496 107 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-379P-201ENST00000363813 104 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-82P-201ENST00000363970 107 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-1293P-201ENST00000384077 107 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 Y_RNA.455-201ENST00000384230 98 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 RNY1P14-201ENST00000384426 108 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 RNU4-25P-201ENST00000410569 230 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 GJA6P-201ENST00000415117 1042 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 RPL21P23-201ENST00000446654 460 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 SNRPCP3-201ENST00000474888 476 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC097473.1-201ENST00000508142 408 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC022360.1-201ENST00000521058 340 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 FAM60DP-201ENST00000524174 632 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC023442.1-201ENST00000531247 422 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC135001.1-201ENST00000544546 283 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC005357.1-201ENST00000588399 301 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AL020997.2-201ENST00000602607 184 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 MIR6128-201ENST00000615528 109 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-156P-201ENST00000621869 107 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 AL732372.2-225ENST00000642124 456 ntBASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZC3H4Q9UPT8 Y_RNA.463-201ENST00000384271 102 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 RNU4-70P-201ENST00000384579 139 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 RNA5SP219-201ENST00000390940 113 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 RNU2-36P-201ENST00000410361 191 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AL139095.3-201ENST00000419672 1203 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 KRT8P51-201ENST00000438938 274 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 SUMO1P3-201ENST00000439961 304 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 RNU7-59P-201ENST00000459101 61 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AC104806.1-201ENST00000508720 308 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AC008526.1-201ENST00000509149 338 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 RNU6-189P-201ENST00000516120 101 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 RNU6-1016P-201ENST00000516689 94 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 RNA5SP373-201ENST00000517271 95 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AL354984.3-201ENST00000604803 325 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AL590099.1-201ENST00000615276 138 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AC098657.3-201ENST00000620434 263 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms