Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC121333.1-201ENST00000567488 2709 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC092681.1-201ENST00000297369 291 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 SNORA17.1-201ENST00000362945 126 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 RNU1-43P-201ENST00000365052 165 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 SNORA5.1-201ENST00000384275 131 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 DUTP5-201ENST00000406790 469 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC079809.1-201ENST00000415468 276 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 CHIAP3-201ENST00000423668 1133 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 RPL7P28-201ENST00000437739 740 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC004383.1-201ENST00000438135 289 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AL138799.3-201ENST00000438968 350 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AL353093.1-201ENST00000441292 436 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 NDUFB1P2-201ENST00000449477 176 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 BX248409.1-201ENST00000455497 255 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 RN7SL188P-201ENST00000469842 285 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC103987.1-201ENST00000473394 348 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 SNRPCP3-201ENST00000474888 476 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AL049830.2-201ENST00000480072 201 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 RPL5P22-201ENST00000480199 884 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-189P-201ENST00000516120 101 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 SNORD27.1-201ENST00000516319 72 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-570P-201ENST00000517051 105 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC090136.1-201ENST00000520009 240 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AP000763.2-201ENST00000540641 163 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC069307.1-201ENST00000602820 447 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC104662.1-201ENST00000604448 511 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 MIR4679-1-201ENST00000637619 75 ntBASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.9□□□□□ -1.3
PDZRN3Q9UPQ7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PDZRN3Q9UPQ7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
PDZRN3Q9UPQ7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
PDZRN3Q9UPQ7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.39-201ENST00000362620 98 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 SNORA22C-201ENST00000384614 134 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 SNORD116-23-201ENST00000384645 92 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AL121972.1-201ENST00000402023 252 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 RPS4XP9-201ENST00000405151 780 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.629-201ENST00000411368 105 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 SYF2P2-201ENST00000417620 583 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC092017.2-201ENST00000427600 362 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 BX284632.1-201ENST00000478218 541 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC107393.1-201ENST00000512403 346 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 SNORA25.14-201ENST00000516481 132 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-62P-201ENST00000516526 102 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC130352.1-201ENST00000602979 661 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC108738.1-201ENST00000603703 237 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 Z82243.1-201ENST00000609432 473 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC097063.1-201ENST00000426714 1797 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC026951.1-201ENST00000559530 2459 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC068870.3-201ENST00000625077 2536 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC003973.3-201ENST00000624863 2822 ntBASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PDZRN3Q9UPQ7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC083837.1-201ENST00000565297 2994 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC114947.2-201ENST00000565748 2125 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.43-201ENST00000362670 111 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.200-201ENST00000364018 102 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 SNORD14.1-201ENST00000365609 90 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 SNORD116-11-201ENST00000383882 92 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms