Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC244098.2-201ENST00000422068 99 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC087879.1-201ENST00000474343 374 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC078785.3-201ENST00000476607 425 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 RPS4XP13-201ENST00000483219 789 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC083906.5-201ENST00000503722 328 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC011352.3-201ENST00000505162 593 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 MTATP6P9-201ENST00000515039 680 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 RNA5SP135-201ENST00000517019 125 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC010376.1-201ENST00000522101 334 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 OR8K4P-201ENST00000534608 872 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 ZNF192P1-203ENST00000565888 810 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 VN1R92P-201ENST00000598511 928 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 SNRPGP15-201ENST00000600149 222 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AL022067.1-201ENST00000602426 454 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC024060.1-201ENST00000607052 494 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC097504.2-201ENST00000608088 454 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AP000238.1-201ENST00000608759 426 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC009269.6-201ENST00000621778 588 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC048347.1-201ENST00000624621 427 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC099654.8-201ENST00000637757 681 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC010733.2-201ENST00000589496 5702 ntBASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN1Q9UMX0 AC000367.1-201ENST00000452711 1766 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 ANKRD36P1-201ENST00000344424 659 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RNU6-600P-201ENST00000362524 99 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RNU5E-10P-201ENST00000363506 118 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RNU6-851P-201ENST00000384565 107 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 SNORD116-23-201ENST00000384645 92 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 MIR607-201ENST00000385241 96 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 MTCO1P56-201ENST00000401674 224 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RPL5P18-201ENST00000406671 891 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AL139098.1-201ENST00000407291 389 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RPL31P2-201ENST00000413849 377 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 BTF3P8-201ENST00000414577 526 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 OR4K6P-201ENST00000416478 897 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 EI24P1-201ENST00000416584 867 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 MTCYBP32-201ENST00000427945 1084 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RPL21P112-201ENST00000434403 463 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 B3GNT2P1-201ENST00000434960 952 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RPL23AP22-201ENST00000437556 453 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 MRPL42P4-201ENST00000453267 443 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RPL23AP44-201ENST00000482216 473 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AC048346.1-201ENST00000510247 144 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 RN7SKP289-201ENST00000517244 295 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AC023632.1-201ENST00000518463 375 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AP001207.1-201ENST00000524051 481 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 OR5G4P-201ENST00000525251 760 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 MTCO3P15-201ENST00000526563 574 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 HIGD1AP10-201ENST00000527837 282 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 YWHAZP1-201ENST00000556286 722 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AP001542.2-201ENST00000593141 364 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AC007566.2-201ENST00000603642 413 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AL139022.2-201ENST00000606934 443 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AL391834.2-201ENST00000609982 546 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 U73479.1-201ENST00000618062 168 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AC018816.2-201ENST00000621460 353 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AC104985.3-201ENST00000623479 597 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 AP003485.1-201ENST00000625093 753 ntBASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN1Q9UMX0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
UBQLN1Q9UMX0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
UBQLN1Q9UMX0 PABPC1P7-201ENST00000413177 1513 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms