Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDC42EP3Q9UKI2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC073343.1-201ENST00000328239 651 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 RNU4-66P-201ENST00000365199 138 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 SNORD42.2-201ENST00000365570 69 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-339P-201ENST00000384310 107 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-146P-201ENST00000384602 108 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 ARL5AP1-201ENST00000418991 388 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 MTND2P23-201ENST00000422990 651 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 RPL30P3-201ENST00000424262 333 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 RPL7L1P10-201ENST00000427790 463 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 GSTM5P1-201ENST00000434751 660 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 LINC02210-201ENST00000444561 288 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 GEMIN8P3-201ENST00000445417 720 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 TPT1P12-201ENST00000448968 492 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 BX276092.4-201ENST00000452056 248 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 NIPA2P5-201ENST00000452282 464 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 PPP1R2P5-201ENST00000457256 603 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 snoU13.20-201ENST00000459180 104 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 RN7SL188P-201ENST00000469842 285 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 MTCO1P29-201ENST00000496868 288 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-1045P-201ENST00000516321 107 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 RN7SKP82-201ENST00000516786 223 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 TRMT10BP1-201ENST00000519377 943 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 RPL10P14-201ENST00000565265 298 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC093249.1-201ENST00000567049 203 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 MIR4293-201ENST00000584305 78 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 MIR7853-201ENST00000584820 132 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 BNIP3P22-201ENST00000593399 556 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AL022099.1-201ENST00000604551 712 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AL360085.1-201ENST00000604713 532 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AL451044.1-201ENST00000604867 238 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC103710.3-201ENST00000608157 948 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AP000843.1-201ENST00000624880 701 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC134503.1-201ENST00000633048 54 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 CYP4F35P-202ENST00000636121 390 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 AC104623.2-202ENST00000623477 4002 ntBASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42EP3Q9UKI2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AL731566.1-201ENST00000620490 1937 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 Y_RNA.167-201ENST00000363735 109 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-1078P-201ENST00000364522 103 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RNU5E-6P-201ENST00000365574 115 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-1029P-201ENST00000384109 107 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 SNORA51.8-201ENST00000384234 132 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AL583835.1-201ENST00000399570 407 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AL136372.1-201ENST00000403060 228 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC096921.1-201ENST00000411661 375 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RNF10P1-201ENST00000418589 369 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 GTF2IP13-201ENST00000438487 386 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC005094.1-201ENST00000440420 368 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 GAPDHP25-201ENST00000447061 1001 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 Y_RNA.639-201ENST00000458981 102 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RNU7-66P-201ENST00000459469 62 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RNA5SP103-201ENST00000459503 118 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC079804.1-201ENST00000461922 436 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC053481.1-201ENST00000467217 306 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC006967.1-201ENST00000467608 589 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 BX284632.1-201ENST00000478218 541 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms