Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL627224.1-201ENST00000448334 444 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC008565.1-201ENST00000509046 885 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC008716.1-201ENST00000511084 513 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC067904.2-201ENST00000517322 1283 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC010735.1-201ENST00000567305 1026 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC069304.3-201ENST00000603938 1084 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AL359511.1-201ENST00000402970 211 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AC005189.1-201ENST00000431286 310 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AC023347.2-201ENST00000433994 462 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 EEF1B2P7-201ENST00000451177 676 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AC008481.1-201ENST00000463278 396 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 RPL23AP45-201ENST00000476406 468 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 RNA5SP24-201ENST00000516478 95 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 RPL23AP84-201ENST00000571193 464 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 MIR4769-201ENST00000584126 77 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AL133393.1-201ENST00000603277 287 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AC008277.2-201ENST00000605196 797 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AC092184.1-201ENST00000625042 715 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AC004944.1-201ENST00000517807 3059 ntBASIC2.34□□□□□ -2.03
CCDC88CQ9P219 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC88CQ9P219 AC080125.1-201ENST00000414888 684 ntBASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 NDUFA5P10-201ENST00000432147 357 ntBASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AL121890.1-201ENST00000435457 205 ntBASIC2.34□□□□□ -2.04
CCDC88CQ9P219 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 HMGB1P26-201ENST00000452520 628 ntBASIC2.34□□□□□ -2.04
CCDC88CQ9P219 ARPC3P2-201ENST00000457786 533 ntBASIC2.34□□□□□ -2.04
CCDC88CQ9P219 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 GTF2IP9-201ENST00000502460 301 ntBASIC2.34□□□□□ -2.04
CCDC88CQ9P219 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AC093755.1-201ENST00000512950 1023 ntBASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AL356575.1-201ENST00000603008 283 ntBASIC2.34□□□□□ -2.04
CCDC88CQ9P219 RPL23AP88-201ENST00000605759 454 ntBASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.34□□□□□ -2.04
CCDC88CQ9P219 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC88CQ9P219 MAPK10-322ENST00000641485 4530 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CCDC88CQ9P219 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC88CQ9P219 RPL32P28-201ENST00000443577 397 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 NPM1P49-201ENST00000448027 714 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 AC233982.1-201ENST00000451247 436 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 RPS27AP9-201ENST00000477681 438 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 OR4G11P-201ENST00000492842 939 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 AP003117.1-201ENST00000602771 554 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 AL392112.1-201ENST00000605115 829 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 AC103810.6-201ENST00000606708 136 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 AC138649.5-201ENST00000637456 137 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 AP000526.1-201ENST00000603308 1388 ntBASIC2.33□□□□□ -2.04
CCDC88CQ9P219 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC88CQ9P219 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC88CQ9P219 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CCDC88CQ9P219 AL360182.1-201ENST00000397433 468 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 RNU2-71P-201ENST00000411395 189 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 HMGN2P35-201ENST00000412164 270 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 MRPL50P2-201ENST00000416821 482 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 MTCO1P43-201ENST00000431831 488 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 RPS20P5-201ENST00000434808 360 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 RPL30P11-201ENST00000495304 339 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC078918.1-201ENST00000498515 228 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 SNORA31.1-201ENST00000515993 133 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 SNORA31.5-201ENST00000516190 133 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC239860.2-201ENST00000525886 270 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC004486.1-201ENST00000546846 233 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC084033.1-201ENST00000550830 633 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AL049870.4-201ENST00000555741 486 ntBASIC2.32□□□□□ -2.04
CCDC88CQ9P219 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms