Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SNORD116-7-201ENST00000384404 95 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 RNU6-809P-201ENST00000384461 107 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 SNORD116-5-201ENST00000384462 95 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 MIR23A-201ENST00000385245 73 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 JKAMPP1-201ENST00000413804 919 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 OR8F1P-201ENST00000425243 930 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 RPL21P112-201ENST00000434403 463 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 OR4C10P-201ENST00000434991 931 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC006011.1-201ENST00000442758 349 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC112653.1-201ENST00000443851 386 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 NPM1P49-201ENST00000448027 714 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 MTCO1P42-201ENST00000457379 726 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC116337.2-201ENST00000477662 156 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 RPS26P15-201ENST00000488067 348 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC080014.1-201ENST00000496877 1201 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC093824.1-201ENST00000508796 343 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC091965.2-201ENST00000512324 613 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC060788.1-201ENST00000521318 469 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 OR5M7P-201ENST00000526140 972 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 MED28P5-201ENST00000528254 438 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC087481.2-201ENST00000565492 330 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC006270.2-201ENST00000578523 652 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 SNORD84-203ENST00000584275 78 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 TPMTP1-201ENST00000592307 737 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC025946.2-201ENST00000603398 234 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC092354.2-201ENST00000607786 514 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 MIR6867-201ENST00000610636 67 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC027807.2-201ENST00000616099 408 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC233309.1-201ENST00000619522 751 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC068724.3-201ENST00000625906 87 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 MIR492-201ENST00000638676 116 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.9□□□□□ -1.78
HCN3Q9P1Z3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HCN3Q9P1Z3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.9□□□□□ -1.78
HCN3Q9P1Z3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.9□□□□□ -1.78
HCN3Q9P1Z3 SPRR2C-201ENST00000290702 219 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 RNU1-13P-201ENST00000384499 162 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 RN7SKP27-201ENST00000410684 333 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 SEPT2P1-201ENST00000419651 180 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 RPL17P36-201ENST00000420302 549 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC244035.1-201ENST00000430042 390 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 UBE2V1P13-201ENST00000436983 439 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 MTND4P32-201ENST00000437189 1237 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 GDI2P2-201ENST00000445131 608 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 CDC27P1-201ENST00000445384 715 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC234775.1-201ENST00000454247 670 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AP000797.1-201ENST00000478870 387 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC078918.1-201ENST00000498515 228 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC107016.1-201ENST00000550463 337 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC007224.1-201ENST00000564410 144 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 RPL23AP87-202ENST00000573039 466 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AL031985.2-201ENST00000600955 480 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AL358072.1-201ENST00000604156 575 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC064801.1-201ENST00000612025 407 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC068831.8-201ENST00000620171 435 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC092125.1-201ENST00000562568 1995 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AC018555.1-201ENST00000567548 1980 ntBASIC3.9□□□□□ -1.79
HCN3Q9P1Z3 AP002001.2-201ENST00000529025 1469 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms