Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 SSXP9-201ENST00000417503 292 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 RPL21P32-201ENST00000419877 477 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 RPF2P1-201ENST00000424137 906 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 MTCO2P1-201ENST00000424648 477 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC241584.1-201ENST00000438469 1241 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 RBMY2UP-201ENST00000453474 324 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC026412.2-201ENST00000512270 1075 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 EEF1B2P4-201ENST00000551398 348 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC008507.1-201ENST00000587506 734 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC096947.1-201ENST00000603233 470 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 OR5H2-201ENST00000355273 945 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 RNA5SP197-201ENST00000363357 119 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 RNU6-207P-201ENST00000384137 107 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 SNORD17-201ENST00000390930 237 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 FO393414.1-201ENST00000428697 1184 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AL512637.2-201ENST00000431287 1256 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC005019.1-201ENST00000436455 431 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC125238.1-201ENST00000448842 249 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 DSTNP2-201ENST00000504533 515 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC008628.1-201ENST00000508663 265 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 KLHL2P1-201ENST00000508691 521 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 TXNP6-201ENST00000510190 310 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC104027.1-201ENST00000521887 300 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC113192.3-201ENST00000529152 742 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 ZNF971P-201ENST00000562068 1249 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC093510.2-201ENST00000562820 896 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 RPAP2P1-201ENST00000603626 1168 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AC018816.2-201ENST00000621460 353 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AP001002.2-201ENST00000625137 386 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 API5P2-201ENST00000397055 1498 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 FAM35CP-201ENST00000554755 2470 ntBASIC3.07□□□□□ -1.92
KLHL28Q9NXS3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 RNU6-468P-201ENST00000384003 109 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 RNA5SP38-201ENST00000410750 119 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 RNA5SP120-201ENST00000410900 112 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AL136133.1-201ENST00000413694 376 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 USP9YP36-201ENST00000424581 829 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 BX890604.2-201ENST00000427883 474 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AC079780.1-201ENST00000428259 207 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 RPL23AP31-201ENST00000456160 467 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 snoU109.4-201ENST00000458953 143 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 OR4P1P-201ENST00000530808 1136 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AC012669.1-201ENST00000603209 283 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AC055876.5-201ENST00000605667 259 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms