Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL356057.1-202ENST00000402263 756 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 AC009963.1-201ENST00000417265 157 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 MTCYBP24-201ENST00000420387 1106 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 AC098826.1-201ENST00000433943 471 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 Z85994.2-201ENST00000434327 452 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 RPS12P2-201ENST00000439728 269 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 ELOCP13-201ENST00000443934 329 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 AC104389.3-201ENST00000445629 235 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 RN7SL499P-201ENST00000481141 276 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 PCNAP1-201ENST00000505363 709 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 RNU6-491P-201ENST00000516099 110 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 RNU1-61P-201ENST00000516107 151 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 AP004371.1-201ENST00000525240 214 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 SNORD84-203ENST00000584275 78 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 AL160237.3-201ENST00000604114 1013 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 AC231759.1-201ENST00000616455 597 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 AC069528.2-201ENST00000624849 1991 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC092435.3-201ENST00000565538 3654 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 MTND5P7-201ENST00000413558 1798 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 MIR1289-1-201ENST00000408836 144 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 AL158825.1-201ENST00000414735 521 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC008565.1-201ENST00000509046 885 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC114781.4-201ENST00000513707 639 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 SNORA31.26-201ENST00000517250 137 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC087276.1-201ENST00000529659 480 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 OR5BN1P-201ENST00000532955 829 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 AC243829.7-201ENST00000633081 225 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CISHQ9NSE2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.6□□□□□ -1.99
CISHQ9NSE2 ZNF37BP-203ENST00000452306 1352 ntBASIC2.6□□□□□ -1.99
CISHQ9NSE2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CISHQ9NSE2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CISHQ9NSE2 ANKRD36P1-201ENST00000344424 659 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 Y_RNA.111-201ENST00000363248 100 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 SNORA41-201ENST00000384675 132 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 AL591034.1-201ENST00000407447 340 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 YWHAZP7-201ENST00000436906 631 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 RPS24P6-201ENST00000452670 400 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC104689.1-201ENST00000473356 768 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 RPS26P21-201ENST00000475397 348 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC107398.1-201ENST00000486904 505 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 RPL36AP51-201ENST00000487216 318 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC111193.1-201ENST00000504097 155 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC119751.5-201ENST00000514077 770 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC016065.2-201ENST00000514530 444 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC008562.1-201ENST00000521763 330 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC060766.3-201ENST00000591442 263 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC026790.2-201ENST00000606282 430 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 AL391597.1-201ENST00000618707 694 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 MIR6852-201ENST00000621699 66 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 AC020923.1-201ENST00000624021 917 ntBASIC2.59□□□□□ -1.99
CISHQ9NSE2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.59□□□□□ -1.99
CISHQ9NSE2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CISHQ9NSE2 PABPC1P7-201ENST00000413177 1513 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.58□□□□□ -2
CISHQ9NSE2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.58□□□□□ -2
CISHQ9NSE2 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 RNU6-1077P-201ENST00000410506 102 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 MTCO1P39-201ENST00000426148 480 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.58□□□□□ -2
CISHQ9NSE2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.58□□□□□ -2
CISHQ9NSE2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.58□□□□□ -2
CISHQ9NSE2 NPM1P13-201ENST00000452663 865 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms