Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CDC42SE1Q9NRR8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 KPNA2P1-201ENST00000458289 1591 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AL022578.1-201ENST00000439330 1433 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 SGO1P1-201ENST00000603525 1447 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 CENPCP1-201ENST00000533085 2578 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 RPL21P132-201ENST00000331267 462 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 FAM133CP-201ENST00000332869 704 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 ODF3-202ENST00000342593 386 ntTSL 5 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 MIR135A2-201ENST00000384854 100 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 MIR512-1-201ENST00000384913 84 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 MIR27A-201ENST00000385073 78 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 MIR16-1-201ENST00000385271 89 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AL445529.1-201ENST00000398713 389 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC110754.1-201ENST00000399740 601 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 HMGB3P2-201ENST00000411913 584 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 TPT1P2-201ENST00000413105 503 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC245054.1-201ENST00000420944 258 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 BX510359.3-201ENST00000422168 306 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AL356387.2-201ENST00000422272 243 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AL691449.1-201ENST00000426570 421 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC091286.1-201ENST00000431233 461 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC005345.1-201ENST00000431868 217 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 UBE2FP3-201ENST00000436366 524 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 Z95327.1-201ENST00000446082 482 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC087588.1-201ENST00000462203 316 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 RN7SL174P-201ENST00000475578 289 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC006390.1-201ENST00000508068 283 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 RNU5A-7P-201ENST00000515979 116 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 SNORA31.18-201ENST00000517043 134 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 BTF3P12-201ENST00000519620 469 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 OR5BN1P-201ENST00000532955 829 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC023824.3-201ENST00000569003 562 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC068135.2-201ENST00000569293 1028 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 MTCO1P40-201ENST00000574371 625 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC011471.1-201ENST00000585766 187 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC105224.1-201ENST00000587055 421 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC133794.1-201ENST00000602731 914 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AL138895.2-201ENST00000603019 178 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC008782.1-201ENST00000603386 430 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC097504.2-201ENST00000608088 454 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC016911.1-201ENST00000613297 452 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC004477.3-201ENST00000614061 590 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC006213.5-201ENST00000619673 288 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 CKAP2P1-201ENST00000555477 2049 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 TPTE2P4-201ENST00000258589 1605 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC004944.1-201ENST00000517807 3059 ntBASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE1Q9NRR8 AC073429.2-201ENST00000569694 1444 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 DEFB108F-201ENST00000344638 222 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 RNU1-105P-201ENST00000363470 161 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 SNORD56.4-201ENST00000363883 71 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC083799.1-201ENST00000366451 910 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 SNORA70C-201ENST00000384538 135 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 MIR551B-201ENST00000384984 96 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 ATF1P1-201ENST00000406040 927 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 CYCSP19-201ENST00000411715 316 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AL592293.2-201ENST00000422292 996 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC006455.6-201ENST00000426192 893 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC007560.1-201ENST00000426912 237 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 ARPC3P1-201ENST00000437218 533 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC092170.1-201ENST00000440211 356 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC007000.2-201ENST00000442564 487 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms