Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 RNU4-90P-201ENST00000362773 141 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 SNORD113-8-201ENST00000363497 74 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 Y_RNA.398-201ENST00000383952 99 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 RNU6-1168P-201ENST00000390831 104 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 Y_RNA.602-201ENST00000410535 92 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 RNA5SP494-201ENST00000410653 129 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 AC099782.1-201ENST00000425889 474 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 TIMM8BP2-201ENST00000445940 251 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 RN7SL369P-201ENST00000477138 299 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 VN1R105P-201ENST00000486595 910 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 AC009120.1-201ENST00000493458 473 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 AC113367.2-201ENST00000505749 160 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 NDUFB5P1-201ENST00000508134 564 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 MTND3P25-201ENST00000509243 135 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 RN7SKP183-201ENST00000517169 324 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 MRPS18CP4-201ENST00000535821 231 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 AC005332.4-201ENST00000592752 579 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 AL162424.1-201ENST00000602325 221 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 AL359091.2-201ENST00000609303 556 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 SNORD39.4-201ENST00000620099 78 ntBASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PRDM9Q9NQV7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PRDM9Q9NQV7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PRDM9Q9NQV7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PRDM9Q9NQV7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PRDM9Q9NQV7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.96□□□□□ -1.45
PRDM9Q9NQV7 AC024587.1-201ENST00000505925 2157 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 Y_RNA.292-201ENST00000364904 97 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 RNU6-1035P-201ENST00000384477 107 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 U3.39-201ENST00000408569 239 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 RN7SKP51-201ENST00000410781 304 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC087650.1-201ENST00000431445 468 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 VPS25P1-201ENST00000455691 508 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 RN7SL362P-201ENST00000494228 267 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC027288.2-201ENST00000553028 243 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AL034351.1-201ENST00000605288 668 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 MIR15A-201ENST00000607334 83 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AP000550.3-201ENST00000637734 379 ntBASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PRDM9Q9NQV7 GTF2IP4-201ENST00000453092 2054 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 BX322639.1-202ENST00000423987 2213 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 BIN2P1-201ENST00000504996 1530 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 LCN1P2-201ENST00000372030 223 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 Y_RNA.435-201ENST00000384095 112 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 Y_RNA.504-201ENST00000384481 104 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 SNORA22C-201ENST00000384614 134 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms