Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSU72Q9NP77 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSU72Q9NP77 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 RNU6-1040P-201ENST00000383974 107 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 RNU2-15P-201ENST00000410692 191 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 DPPA2P2-201ENST00000418220 897 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 BRWD1P3-201ENST00000428816 390 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 TIMM8BP2-201ENST00000445940 251 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AP006222.1-205ENST00000450734 457 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AL445433.1-201ENST00000457507 257 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 ACA64.1-201ENST00000459171 127 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 RN7SL441P-201ENST00000492388 296 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 COX7A2P2-201ENST00000505291 250 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC079140.5-201ENST00000507882 310 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 RNU6-764P-201ENST00000516396 105 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC060775.1-201ENST00000518241 520 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AL390726.5-202ENST00000564800 256 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC092121.1-201ENST00000569452 202 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 MIR4433B-201ENST00000581329 102 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC069061.3-201ENST00000582254 823 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AL008729.2-201ENST00000606393 473 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC023813.4-201ENST00000607580 580 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AL138726.1-201ENST00000614873 333 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 MIR6864-201ENST00000617935 70 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AC103705.1-201ENST00000619013 241 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 U6.114-201ENST00000636407 96 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 ZNF519P1-201ENST00000449011 1626 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 AL031595.2-201ENST00000624215 19071 ntBASIC5.18□□□□□ -1.58
SSU72Q9NP77 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSU72Q9NP77 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SSU72Q9NP77 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSU72Q9NP77 ZNF807-201ENST00000328088 1707 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSU72Q9NP77 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AP001284.1-201ENST00000528393 2118 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSU72Q9NP77 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSU72Q9NP77 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 RNU6-601P-201ENST00000384540 107 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 U3.29-201ENST00000391296 212 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC092642.1-201ENST00000392417 425 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 EIF4E2P1-201ENST00000393781 255 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AL360182.1-201ENST00000397433 468 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AL049697.2-201ENST00000403708 294 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 MIR1302-3-201ENST00000408128 138 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 HMGN1P20-201ENST00000411849 300 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 ATG3P1-201ENST00000419507 911 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 GNG5P5-201ENST00000420444 220 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AL139396.1-201ENST00000421137 167 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 USP9YP16-201ENST00000430287 407 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 NRBF2P3-201ENST00000432731 865 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms