Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL583835.1-201ENST00000399570 407 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 RPS16P5-201ENST00000406501 404 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AL356387.2-201ENST00000422272 243 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 RPS27AP14-201ENST00000422868 454 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 USP9YP9-201ENST00000429406 715 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC096638.2-201ENST00000434965 711 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 THAP5P1-201ENST00000439089 262 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC108734.1-201ENST00000439549 399 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC112653.1-201ENST00000443851 386 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 CFTRP1-201ENST00000456646 183 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC092451.1-201ENST00000480211 153 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AL024509.2-201ENST00000493462 493 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 RPL7P23-201ENST00000493874 747 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 UBE2CP3-201ENST00000502715 450 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 KLHL2P1-201ENST00000508691 521 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 RN7SKP289-201ENST00000517244 295 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 IGKV2-38-201ENST00000517443 247 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AL022099.1-201ENST00000604551 712 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AL592436.1-201ENST00000605135 558 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC092354.1-201ENST00000606057 376 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC092653.1-201ENST00000608509 531 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC008443.7-201ENST00000622195 246 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 U6.98-201ENST00000637157 84 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC008013.2-202ENST00000637965 364 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 MTND5P33-201ENST00000571250 1450 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 AL133383.2-201ENST00000622958 2336 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AP001148.1-201ENST00000624124 2359 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 RNU5F-6P-201ENST00000362979 116 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 SNORD116-2-201ENST00000384274 95 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 SNORD116-6-201ENST00000384711 96 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 SKINT1L-201ENST00000401057 817 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 RPEP3-201ENST00000425462 676 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 OR4K11P-201ENST00000431829 904 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC109583.1-201ENST00000432156 268 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 ATP5HP2-201ENST00000433885 485 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 RPL37P21-201ENST00000435890 276 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 MTND1P30-201ENST00000441241 901 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 RPL36AP33-201ENST00000450395 310 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 SBDSP1-204ENST00000453858 737 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 snoU13.4-201ENST00000458916 104 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 SNRPGP3-201ENST00000469405 227 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 RPL32P9-201ENST00000487963 407 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AF213884.1-201ENST00000488102 463 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC093278.1-201ENST00000494700 600 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AL139099.1-201ENST00000497398 403 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 NDUFA5P2-201ENST00000519723 344 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 TVP23BP1-201ENST00000557500 617 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 FAM60BP-201ENST00000578364 658 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC008507.1-201ENST00000587506 734 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 RPL12P25-202ENST00000598100 674 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC110760.3-201ENST00000598794 467 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC020910.2-201ENST00000603635 610 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 PRELID3BP8-201ENST00000604148 295 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC091965.4-201ENST00000607691 587 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AL391497.1-201ENST00000608671 547 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AL591424.2-201ENST00000617023 128 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms