Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 DHX40P1-201ENST00000588725 1412 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 Y_RNA.31-201ENST00000362574 102 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-97P-201ENST00000363387 104 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 SNORA62.1-201ENST00000364287 154 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-463P-201ENST00000384340 107 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 MIR105-2-201ENST00000385083 81 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 RPL23AP27-201ENST00000415161 451 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 TIMM9P1-201ENST00000436122 256 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 RHOT1P3-201ENST00000436571 331 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 PSMD10P3-201ENST00000437000 448 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 RPL7P52-201ENST00000449200 742 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AP000942.1-201ENST00000463969 747 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AL049714.1-201ENST00000466686 347 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC083904.1-201ENST00000487828 231 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC005726.1-201ENST00000494679 427 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 KLHL2P1-201ENST00000508691 521 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 SNORD27.1-201ENST00000516319 72 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-1038P-201ENST00000516516 104 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC100830.2-201ENST00000581636 240 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC124312.5-201ENST00000604451 268 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AP005432.2-201ENST00000608162 586 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC019193.3-201ENST00000609144 554 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC015908.5-201ENST00000623289 343 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC099494.2-201ENST00000623371 978 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 ELL2P4-201ENST00000446870 1376 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 AC107068.1-201ENST00000563286 4218 ntBASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A2Q9H9S3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 XPOTP1-201ENST00000443317 2398 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC097714.1-201ENST00000511272 1647 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 OR5P1P-201ENST00000299512 925 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 SNURFL-201ENST00000309296 343 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 Y_RNA.22-201ENST00000362492 102 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 Y_RNA.100-201ENST00000363141 102 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 SNORA58B-201ENST00000364259 136 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-38P-201ENST00000384085 107 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RNY4P36-201ENST00000391116 96 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AL606923.1-201ENST00000406616 190 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 U3.32-201ENST00000408116 212 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RN7SKP114-201ENST00000410327 279 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 Y_RNA.605-201ENST00000410577 105 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RN7SKP213-201ENST00000410746 298 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RNU2-22P-201ENST00000411266 212 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AL161631.1-201ENST00000417933 486 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 OR2AH1P-201ENST00000425717 928 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 PSMA6P3-201ENST00000428242 164 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RPS3AP52-201ENST00000435639 297 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RPL34P20-201ENST00000442771 351 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 snoU13.8-201ENST00000458890 104 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-1218P-201ENST00000458990 108 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-333P-201ENST00000459117 107 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC087879.1-201ENST00000474343 374 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RPL7AP6-201ENST00000477943 801 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms