Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 DPRXP5-201ENST00000604662 539 ntBASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 AC107952.2-201ENST00000606048 486 ntBASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 U3.45-201ENST00000607547 219 ntBASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 MIR6716-201ENST00000613413 80 ntBASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 AC231657.1-201ENST00000624313 397 ntBASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 OR5BR1P-201ENST00000524992 1330 ntBASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VIPAS39Q9H9C1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
VIPAS39Q9H9C1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.4□□□□□ -1.86
VIPAS39Q9H9C1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
VIPAS39Q9H9C1 AC138915.3-201ENST00000562908 1389 ntBASIC3.4□□□□□ -1.86
VIPAS39Q9H9C1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.4□□□□□ -1.86
VIPAS39Q9H9C1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 RNA5SP258-201ENST00000362750 119 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 U3.29-201ENST00000391296 212 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 DHFRP6-201ENST00000401776 268 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 RNU2-15P-201ENST00000410692 191 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC092447.6-201ENST00000414578 210 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 TIMM9P2-201ENST00000419324 266 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 MTND2P20-201ENST00000440805 661 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC239367.2-201ENST00000447309 705 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 MTCO2P15-201ENST00000532655 656 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 MIR4637-201ENST00000582405 84 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC234772.3-201ENST00000602277 528 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC006557.5-201ENST00000603126 811 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 BNIP3P11-201ENST00000603878 563 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC006270.3-201ENST00000605967 1036 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC097478.2-201ENST00000610572 514 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC069234.5-201ENST00000611056 416 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 uc_338.1-201ENST00000612113 180 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC091903.1-201ENST00000624322 454 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC091925.2-201ENST00000625059 256 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AP004289.2-201ENST00000444413 1457 ntBASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.4□□□□□ -1.87
VIPAS39Q9H9C1 AP000776.1-201ENST00000530032 1663 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC091152.2-201ENST00000591628 2569 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AL157700.1-201ENST00000561973 1432 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 SNORA56-201ENST00000383966 129 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 RNU6-821P-201ENST00000390995 107 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 SNORA48.8-201ENST00000391324 134 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 RNU6-757P-201ENST00000410334 100 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 RNA5SP229-201ENST00000410809 99 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 RPS25P9-201ENST00000435591 252 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 SNORD11.1-201ENST00000459482 85 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC026410.2-201ENST00000460281 156 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC010587.2-201ENST00000511727 448 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms