Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 OR5G4P-201ENST00000525251 760 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AP000790.1-201ENST00000528891 737 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC022080.3-201ENST00000544433 482 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AP001542.2-201ENST00000593141 364 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC005000.2-201ENST00000605468 310 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AL121895.2-201ENST00000619558 447 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC091953.5-201ENST00000622919 233 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AL157770.1-201ENST00000623049 439 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 MTND5P31-201ENST00000419366 1374 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 RNU6-582P-201ENST00000362989 107 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 RNU6-839P-201ENST00000363347 108 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 RNU6-1243P-201ENST00000364028 107 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 RNU6-224P-201ENST00000384055 107 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AL139098.1-201ENST00000407291 389 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 NUP35P2-201ENST00000416748 943 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 ELOCP6-201ENST00000429066 328 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AL009048.1-201ENST00000450437 298 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 CFTRP1-201ENST00000456646 183 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 ELOCP12-201ENST00000458706 328 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 GTF2IP9-201ENST00000502460 301 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AP001372.4-201ENST00000524889 472 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AL445435.1-201ENST00000604232 665 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC010975.3-201ENST00000618727 978 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC022960.3-201ENST00000619794 441 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 U6.98-201ENST00000637157 84 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC010733.2-201ENST00000589496 5702 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AC096644.4-201ENST00000563417 2912 ntBASIC3.49□□□□□ -1.85
RNF41Q9H4P4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF41Q9H4P4 AL355578.1-201ENST00000607405 1328 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 RPL21P3-201ENST00000395517 478 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 RNU6-584P-201ENST00000410350 95 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 RPL7P8-201ENST00000411964 730 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AC233981.1-201ENST00000423224 461 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 RPL31P54-201ENST00000429803 370 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AC146507.2-201ENST00000460608 476 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 RPL23AP44-201ENST00000482216 473 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AC021146.5-201ENST00000503544 545 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 TPT1P8-201ENST00000510120 555 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 RNU6-885P-201ENST00000516607 104 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 MIR4509-3-201ENST00000578671 94 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 MIR4509-2-201ENST00000583920 94 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 MIR4509-1-201ENST00000618224 94 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AL158163.2-201ENST00000619110 700 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AC109454.4-201ENST00000623411 649 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 AC087821.2-201ENST00000637086 450 ntBASIC3.48□□□□□ -1.85
RNF41Q9H4P4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RNF41Q9H4P4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms