Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS11Q9H270 DNAJC8P1-201ENST00000554535 372 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 CYCSP2-201ENST00000558168 301 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS11Q9H270 LARP7P2-201ENST00000575306 125 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC209154.1-201ENST00000582156 337 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC011447.4-201ENST00000587562 111 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC022916.3-201ENST00000592961 742 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS11Q9H270 AC115286.1-201ENST00000604298 434 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC010424.2-201ENST00000607594 443 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC231657.1-201ENST00000624313 397 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AL353662.3-201ENST00000625131 237 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS11Q9H270 CYP3A51P-201ENST00000633513 256 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 IQCB2P-201ENST00000401788 1633 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 MTCO1P14-201ENST00000441695 1559 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AL359893.1-201ENST00000447628 1580 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 MTCO1P24-201ENST00000515438 1558 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC108467.2-201ENST00000617640 1597 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
VPS11Q9H270 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS11Q9H270 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VPS11Q9H270 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS11Q9H270 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS11Q9H270 RNU6-1318P-201ENST00000365389 103 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 RNU6-356P-201ENST00000384140 107 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 SNORA70-201ENST00000384436 135 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AL354719.1-201ENST00000406535 843 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 RN7SKP229-201ENST00000410465 302 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 OR9R1P-201ENST00000412200 877 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 OR1AA1P-201ENST00000419597 916 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 PDSS1P1-201ENST00000422953 1114 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 RPL7P57-201ENST00000423238 740 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 Z74021.1-201ENST00000423610 407 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 RPS17P8-201ENST00000434525 335 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AL356276.2-201ENST00000435919 558 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC016691.1-201ENST00000441321 413 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS11Q9H270 Y_RNA.632-201ENST00000459189 102 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC097493.1-201ENST00000463958 372 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC022034.3-201ENST00000471393 478 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 RPL35P6-201ENST00000490024 372 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC103851.1-201ENST00000506833 274 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS11Q9H270 TMEM248P1-201ENST00000510579 951 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS11Q9H270 AC005798.1-201ENST00000513715 387 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 RNU6-123P-201ENST00000516163 102 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 RNA5SP392-201ENST00000516905 112 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC104986.1-201ENST00000517978 436 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS11Q9H270 AC092490.3-201ENST00000545370 572 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS11Q9H270 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS11Q9H270 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS11Q9H270 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS11Q9H270 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS11Q9H270 AC007687.1-201ENST00000602704 304 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AL162413.1-201ENST00000603198 110 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 RPL23AP92-201ENST00000603609 255 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 SNRPGP17-201ENST00000603780 214 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC025588.3-201ENST00000604182 274 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AC103710.4-201ENST00000609301 899 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS11Q9H270 RMST_7.1-201ENST00000621935 268 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS11Q9H270 AC110994.2-201ENST00000635481 492 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 TPTEP1-208ENST00000636884 213 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS11Q9H270 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS11Q9H270 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS11Q9H270 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS11Q9H270 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS11Q9H270 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS11Q9H270 MTND4P14-201ENST00000435799 1354 ntBASIC4.77□□□□□ -1.65
VPS11Q9H270 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS11Q9H270 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS11Q9H270 FARSBP1-201ENST00000435808 1778 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS11Q9H270 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
VPS11Q9H270 U8.3-201ENST00000363321 132 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 SNORA4.3-201ENST00000365564 137 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 SNORD42.2-201ENST00000365570 69 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 RNU6-730P-201ENST00000383954 104 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 Y_RNA.474-201ENST00000384341 102 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 MIR223-201ENST00000385204 110 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS11Q9H270 U8.14-201ENST00000390843 143 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS11Q9H270 RNA5SP118-201ENST00000410385 109 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms