Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC090502.2-201ENST00000549267 280 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 BDH2P1-201ENST00000602288 736 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AC244100.1-202ENST00000621554 382 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AC073476.4-201ENST00000628409 72 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 RNA5SP267-201ENST00000364893 126 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 RNU2-15P-201ENST00000410692 191 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 RNA5SP107-201ENST00000411358 122 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AL158156.1-201ENST00000422509 473 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC233728.2-201ENST00000425348 757 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 DPPA2P1-201ENST00000428060 556 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 ISCA1P2-201ENST00000438679 421 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 HMGN1P5-201ENST00000448591 263 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 RPL36AP33-201ENST00000450395 310 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AL445669.2-201ENST00000454425 421 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC091153.1-201ENST00000466297 402 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC112198.4-201ENST00000515450 351 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 SNORD59.2-201ENST00000516873 68 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC090666.1-201ENST00000578241 445 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC069200.1-201ENST00000609511 323 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AL392048.1-201ENST00000613946 534 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 AC231759.1-201ENST00000616455 597 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 MTCO1P23-201ENST00000415223 1526 ntBASIC3.29□□□□□ -1.88
POLR1EQ9GZS1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 SNORA63.1-201ENST00000362493 131 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 MIR34B-201ENST00000385076 84 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC063979.1-201ENST00000415539 377 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC005300.1-201ENST00000428401 373 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC005326.1-201ENST00000429197 123 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AL589880.1-201ENST00000448271 287 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC140076.1-201ENST00000449897 361 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 RNA5SP310-201ENST00000459084 116 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC091179.1-201ENST00000461606 579 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 RPL6P9-201ENST00000466502 859 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC006483.1-201ENST00000487308 313 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 HSPD1P15-201ENST00000505573 1122 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC074250.1-201ENST00000511117 192 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC010625.1-201ENST00000511296 403 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC026412.2-201ENST00000512270 1075 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC023825.1-201ENST00000566704 1030 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 MTCO3P24-201ENST00000572729 782 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 VN1R87P-201ENST00000596706 487 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC106900.2-201ENST00000604994 317 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC008759.3-201ENST00000613300 508 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC090897.3-201ENST00000636973 1157 ntBASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1EQ9GZS1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 SNORD51-201ENST00000384320 80 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 RNVU1-14-201ENST00000384770 164 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 MIR217-201ENST00000384817 110 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms