Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AC006329.2-201ENST00000611491 394 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 VN1R7P-201ENST00000619242 903 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 MIR3651-201ENST00000630427 90 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AL136164.4-201ENST00000625013 2135 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 GDI2P1-201ENST00000429312 1336 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 MAPK10-362ENST00000641864 4484 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 RNU6-989P-201ENST00000362756 107 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 FCF1P2-201ENST00000415284 583 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC127537.2-201ENST00000439258 465 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 RPS3AP12-201ENST00000443616 753 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 MTCO1P48-201ENST00000448024 1096 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC104978.1-201ENST00000449387 391 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 BX510359.1-201ENST00000456973 237 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 RPL23AP44-201ENST00000482216 473 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC093767.1-201ENST00000504523 156 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC114967.1-201ENST00000504890 259 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC004062.1-201ENST00000509926 645 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 MTCYBP37-201ENST00000510642 1133 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 MTCO3P27-201ENST00000514397 196 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC112198.4-201ENST00000515450 351 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 RNU1-61P-201ENST00000516107 151 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 snoZ278.1-201ENST00000517059 112 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC019227.1-201ENST00000526902 510 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC068339.2-201ENST00000534395 618 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 MIR5680-201ENST00000577577 84 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 MIR5004-201ENST00000579078 107 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AP001029.3-201ENST00000588063 596 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AL606834.2-201ENST00000602954 668 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AL161756.2-201ENST00000604597 246 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 AC118273.1-201ENST00000525324 3006 ntBASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCSER1Q9C0I3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CCSER1Q9C0I3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 MIR148B-201ENST00000362252 99 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 RNU6-1066P-201ENST00000363573 105 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 SNORD82-201ENST00000365530 70 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 DEFB109C-201ENST00000382575 264 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 DEFB109B-201ENST00000382656 264 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 RNU6-1176P-201ENST00000390955 107 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AL133264.1-201ENST00000407157 562 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC092638.1-201ENST00000411966 1275 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC108734.1-201ENST00000439549 399 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC092393.1-201ENST00000439625 742 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 SSXP4-201ENST00000451349 245 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 PTGES3P5-201ENST00000455109 434 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AL136126.1-201ENST00000473603 402 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC023632.1-201ENST00000518463 375 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC037471.2-201ENST00000564941 598 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC104072.1-201ENST00000568817 668 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC006116.7-201ENST00000590141 756 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC092953.2-201ENST00000608000 699 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AP000238.1-201ENST00000608759 426 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 AC018692.3-201ENST00000623929 123 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 SNORA50A-202ENST00000629536 136 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 MIR622-201ENST00000638396 96 ntBASIC3.52□□□□□ -1.85
CCSER1Q9C0I3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms