Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPS27P23-201ENST00000487608 251 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 EIF5A2P1-201ENST00000564027 460 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AC005951.1-201ENST00000576706 485 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 MIR4504-201ENST00000577413 92 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 VN1R88P-201ENST00000596787 292 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AC069234.5-201ENST00000611056 416 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 PLCE1P1-201ENST00000622094 305 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AC084035.1-201ENST00000634543 607 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AL136360.1-201ENST00000503377 1900 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 PTGES3P2-201ENST00000407942 482 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 MTND2P16-201ENST00000419987 799 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 RPL36P19-201ENST00000430744 301 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 RAB11AP1-201ENST00000442978 646 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AL109933.2-201ENST00000452651 260 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 TMEM248P1-201ENST00000510579 951 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AC027338.1-201ENST00000514840 825 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 MTCO1P30-201ENST00000515244 580 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 AC138649.5-201ENST00000637456 137 ntBASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RPAP1Q9BWH6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AL359693.1-201ENST00000614959 2407 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AL355578.1-201ENST00000607405 1328 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AL355379.1-201ENST00000405542 640 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 RNU6-77P-201ENST00000410554 91 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 PAICSP7-201ENST00000419829 962 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC019097.1-201ENST00000424783 735 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC093151.1-201ENST00000427711 313 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AL590399.6-201ENST00000446396 307 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AL162389.1-201ENST00000449233 177 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC078857.1-201ENST00000469870 667 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 RN7SL432P-201ENST00000484057 298 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 MTND4LP22-201ENST00000508209 276 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 COX6CP8-201ENST00000522620 226 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC104115.2-201ENST00000523026 687 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC079600.2-201ENST00000550076 130 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC004217.3-201ENST00000551552 878 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 MTCYBP28-201ENST00000566728 1132 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 VN1R90P-201ENST00000595717 726 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC136601.2-201ENST00000604356 474 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC007619.2-201ENST00000605743 379 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 AC073592.7-201ENST00000623659 507 ntBASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RPAP1Q9BWH6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 MTCO1P6-201ENST00000481192 1384 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC025263.3-201ENST00000622965 1396 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC117529.2-201ENST00000512159 2068 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 RNU6-1151P-201ENST00000384684 107 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 RPS4XP8-201ENST00000402039 771 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 MTATP6P11-201ENST00000428071 670 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 RPL17P35-201ENST00000432217 549 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 VDAC1P3-201ENST00000434069 851 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AL662791.1-201ENST00000441992 928 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms