Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.18□□□□□ -1.9
NPAS2Q99743 CR383658.2-201ENST00000547576 1525 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPAS2Q99743 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPAS2Q99743 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
NPAS2Q99743 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.17□□□□□ -1.9
NPAS2Q99743 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.17□□□□□ -1.9
NPAS2Q99743 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.17□□□□□ -1.9
NPAS2Q99743 OR5H2-201ENST00000355273 945 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPAS2Q99743 RNU1-70P-201ENST00000362618 164 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 RN7SKP111-201ENST00000410349 271 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 BOLA3P4-201ENST00000418151 400 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AC233728.2-201ENST00000425348 757 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 RAC1P8-201ENST00000427086 527 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.17□□□□□ -1.9
NPAS2Q99743 AP000949.1-201ENST00000438328 629 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 HIGD1AP11-201ENST00000438361 280 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 Z99127.3-201ENST00000448158 395 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 PTGES3P5-201ENST00000455109 434 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 RPS23P3-201ENST00000470993 430 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 RN7SL601P-201ENST00000471221 293 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 RPL21P13-201ENST00000488305 481 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AC093278.1-201ENST00000494700 600 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 DSTNP2-201ENST00000504533 515 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPAS2Q99743 RNU6-27P-201ENST00000516146 107 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 SNORA31.8-201ENST00000516327 108 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 SNORA74D-201ENST00000516404 141 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 snoZ278.1-201ENST00000517059 112 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AP003355.1-201ENST00000518956 587 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.17□□□□□ -1.9
NPAS2Q99743 IGHV3-76-201ENST00000522465 295 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPAS2Q99743 OR4R2P-201ENST00000530815 597 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 SNRPGP16-201ENST00000533275 226 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.17□□□□□ -1.9
NPAS2Q99743 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.17□□□□□ -1.9
NPAS2Q99743 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.17□□□□□ -1.9
NPAS2Q99743 AC015917.1-201ENST00000579654 510 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPAS2Q99743 AC090330.1-201ENST00000588646 764 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 BDH2P1-201ENST00000602288 736 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 BNIP3P19-201ENST00000605397 577 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AC092574.1-201ENST00000609771 420 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 uc_338.1-201ENST00000612113 180 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.17□□□□□ -1.9
NPAS2Q99743 MIR3651-201ENST00000630427 90 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 CYP3A51P-201ENST00000633513 256 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 AC127502.3-201ENST00000636170 1206 ntBASIC3.17□□□□□ -1.9
NPAS2Q99743 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPAS2Q99743 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPAS2Q99743 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS2Q99743 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
NPAS2Q99743 MTND5P24-201ENST00000438892 1767 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS2Q99743 RNU6-1066P-201ENST00000363573 105 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NPAS2Q99743 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.16□□□□□ -1.9
NPAS2Q99743 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS2Q99743 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS2Q99743 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS2Q99743 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS2Q99743 AC109780.2-201ENST00000413467 845 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS2Q99743 AC012065.2-201ENST00000421295 375 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS2Q99743 MTCYBP34-201ENST00000439552 670 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AL591503.2-201ENST00000442314 1005 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 RPL17P49-201ENST00000443728 411 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.16□□□□□ -1.9
NPAS2Q99743 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.16□□□□□ -1.9
NPAS2Q99743 BTF3P5-201ENST00000457252 467 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 MLLT10P2-201ENST00000506434 249 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 KLHL2P1-201ENST00000508691 521 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.16□□□□□ -1.9
NPAS2Q99743 MTCO3P27-201ENST00000514397 196 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.16□□□□□ -1.9
NPAS2Q99743 SNORA48.10-201ENST00000516965 160 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 RNU6-467P-201ENST00000517027 110 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 MTND1P36-201ENST00000522384 936 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 OR4P1P-201ENST00000530808 1136 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AC011611.1-201ENST00000552179 197 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NPAS2Q99743 MIR5195-201ENST00000583555 115 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.16□□□□□ -1.9
NPAS2Q99743 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.16□□□□□ -1.9
NPAS2Q99743 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.16□□□□□ -1.9
NPAS2Q99743 AC006557.5-201ENST00000603126 811 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AC012669.1-201ENST00000603209 283 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.16□□□□□ -1.9
NPAS2Q99743 SNORD39.4-201ENST00000620099 78 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AC091903.1-201ENST00000624322 454 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 AC006927.2-201ENST00000639256 389 ntBASIC3.16□□□□□ -1.9
NPAS2Q99743 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms