Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AP005432.1-201ENST00000580891 3485 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PHOX2BQ99453 DDX18P3-201ENST00000404856 2007 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PHOX2BQ99453 CLCA3P-203ENST00000490028 2781 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PHOX2BQ99453 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PHOX2BQ99453 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PHOX2BQ99453 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PHOX2BQ99453 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PHOX2BQ99453 TTC41P-205ENST00000551270 3963 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 Z75746.1-201ENST00000440243 2080 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PHOX2BQ99453 ZNF402P-201ENST00000404435 3100 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 RNU6-1155P-201ENST00000363554 107 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 Y_RNA.200-201ENST00000364018 102 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 AL133388.1-201ENST00000404509 287 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 Y_RNA.592-201ENST00000410274 109 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 RN7SKP296-201ENST00000411185 341 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 AC130360.1-201ENST00000425489 1117 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 AL772161.1-201ENST00000439130 476 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 AL360271.2-201ENST00000447710 161 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 RN7SL817P-201ENST00000480777 288 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 AC130365.2-201ENST00000525882 1201 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 TRAV32-201ENST00000553993 340 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 AC006557.5-201ENST00000603126 811 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 RPSAP73-201ENST00000614820 330 ntBASIC6.34□□□□□ -1.39
PHOX2BQ99453 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PHOX2BQ99453 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
PHOX2BQ99453 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PHOX2BQ99453 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
PHOX2BQ99453 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PHOX2BQ99453 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PHOX2BQ99453 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.4
PHOX2BQ99453 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.34□□□□□ -1.4
PHOX2BQ99453 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
PHOX2BQ99453 Z97989.1-201ENST00000531702 2421 ntBASIC6.34□□□□□ -1.4
PHOX2BQ99453 AC023421.1-201ENST00000590535 1785 ntBASIC6.34□□□□□ -1.4
PHOX2BQ99453 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 AC007159.1-201ENST00000566529 4706 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 THAP12P5-201ENST00000405864 2275 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 Y_RNA.27-201ENST00000362540 103 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 RNU1-134P-201ENST00000362935 165 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 RNA5SP346-201ENST00000363541 121 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 U3.13-201ENST00000364804 214 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 RNU2-14P-201ENST00000411053 191 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 RPL21P38-201ENST00000418090 167 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 AL445305.1-201ENST00000432577 575 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 USP9YP7-201ENST00000436723 430 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 AL513124.1-201ENST00000450410 614 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 USP9YP32-201ENST00000452432 430 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 NDUFB4P10-201ENST00000452541 359 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 RN7SL184P-201ENST00000488308 297 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 AC110792.1-201ENST00000491826 472 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 AMZ2P1-203ENST00000565833 850 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 AC004232.1-201ENST00000571388 208 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 MIR4716-201ENST00000579628 84 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 MIR4512-201ENST00000583257 77 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 AC087575.1-201ENST00000585087 229 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 IMMP1LP3-201ENST00000604197 224 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 AL121917.1-203ENST00000605534 577 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 AC127459.3-201ENST00000624328 466 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 AC073869.10-201ENST00000642016 354 ntBASIC6.33□□□□□ -1.4
PHOX2BQ99453 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PHOX2BQ99453 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
PHOX2BQ99453 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms