Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.14□□□□□ -2.07
CFAP54Q96N23 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CFAP54Q96N23 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.13□□□□□ -2.07
CFAP54Q96N23 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CFAP54Q96N23 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CFAP54Q96N23 AL358075.3-201ENST00000426289 226 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 FO393414.1-201ENST00000428697 1184 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 MTND2P29-201ENST00000438595 412 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC004263.1-201ENST00000479327 332 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.13□□□□□ -2.07
CFAP54Q96N23 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC245517.5-201ENST00000611529 162 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 AL359198.2-201ENST00000611836 194 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CFAP54Q96N23 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
CFAP54Q96N23 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC016717.2-201ENST00000609089 5141 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CFAP54Q96N23 CDC27P2-201ENST00000425026 1922 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 SNORA41-201ENST00000384675 132 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 RNA5SP210-201ENST00000391034 120 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC098826.1-201ENST00000433943 471 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.13□□□□□ -2.07
CFAP54Q96N23 SNORD13-201ENST00000459299 104 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.13□□□□□ -2.07
CFAP54Q96N23 OR10D4P-201ENST00000525892 951 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC068339.2-201ENST00000534395 618 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC091953.2-201ENST00000623979 160 ntBASIC2.13□□□□□ -2.07
CFAP54Q96N23 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
CFAP54Q96N23 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CFAP54Q96N23 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CFAP54Q96N23 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CFAP54Q96N23 AC107021.2-201ENST00000567714 2095 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 AL353746.1-201ENST00000566293 6881 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CFAP54Q96N23 AL162578.1-201ENST00000406202 378 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 RPS15AP6-201ENST00000420703 385 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 MTCO2P17-201ENST00000424336 677 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 AC092473.1-201ENST00000441098 221 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 RNU7-95P-201ENST00000459222 64 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 AC068305.1-201ENST00000497406 726 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 AC005951.1-201ENST00000576706 485 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CFAP54Q96N23 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CFAP54Q96N23 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CFAP54Q96N23 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 AC245517.2-201ENST00000442890 346 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 TXNP6-201ENST00000510190 310 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 OR7K1P-201ENST00000546439 926 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 DNAJC19P9-201ENST00000555084 351 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 MIR6733-201ENST00000635723 61 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 API5P2-201ENST00000397055 1498 ntBASIC2.12□□□□□ -2.07
CFAP54Q96N23 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CFAP54Q96N23 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CFAP54Q96N23 MTND5P23-201ENST00000430812 1655 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.11□□□□□ -2.07
CFAP54Q96N23 RPS4XP11-201ENST00000446897 772 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 AC126182.1-201ENST00000478134 357 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.11□□□□□ -2.07
CFAP54Q96N23 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.11□□□□□ -2.07
CFAP54Q96N23 AC105137.2-201ENST00000569073 466 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 AL049840.6-202ENST00000603373 279 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CFAP54Q96N23 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CFAP54Q96N23 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CFAP54Q96N23 RPS7P5-201ENST00000441482 581 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 AC005730.3-201ENST00000583067 366 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.11□□□□□ -2.07
CFAP54Q96N23 AC011492.1-201ENST00000600023 315 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CFAP54Q96N23 PPP1R2P5-201ENST00000457256 603 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 RPL21P71-201ENST00000465598 459 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 POU5F1P7-201ENST00000508759 541 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.11□□□□□ -2.07
CFAP54Q96N23 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
CFAP54Q96N23 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CFAP54Q96N23 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CFAP54Q96N23 RN7SKP226-201ENST00000364912 300 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 MIR1183-201ENST00000408856 89 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 RPS7P2-201ENST00000435134 607 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 RPL23AP14-201ENST00000468281 468 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms