Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 MIR6891-201ENST00000618788 93 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 C2orf27A-204ENST00000623058 969 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 RNA5SP196-201ENST00000625967 102 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 MIR1302-1-201ENST00000637932 143 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHFRQ96EP1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC134882.1-201ENST00000603738 1676 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHFRQ96EP1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHFRQ96EP1 ENSAP3-201ENST00000312710 333 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 RNU5D-1-201ENST00000363299 116 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 RNU1-132P-201ENST00000364300 164 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 SNORA70C-201ENST00000384538 135 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 SDHCP2-201ENST00000398565 501 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AL122016.1-201ENST00000403365 367 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 RN7SKP27-201ENST00000410684 333 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 SNRPFP1-201ENST00000414761 252 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 RPS7P15-201ENST00000415804 584 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 RPS27AP14-201ENST00000422868 454 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 SDCBPP2-201ENST00000424643 885 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 CALM1P1-201ENST00000442082 433 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AL645939.1-201ENST00000453429 797 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AL121877.1-201ENST00000453704 622 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 Z82190.1-201ENST00000454534 490 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 DHFRP3-201ENST00000455595 559 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC053481.1-201ENST00000467217 306 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC112206.1-201ENST00000468416 477 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC090686.1-201ENST00000481577 749 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC105137.1-201ENST00000484355 562 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 SETP14-201ENST00000497538 873 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC139783.2-201ENST00000504847 1145 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 RNU6-1281P-201ENST00000516223 105 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 RNY4P37-201ENST00000516225 96 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 RNU6-1004P-201ENST00000516584 111 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 HSPA8P13-201ENST00000523715 472 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 ELOCP31-201ENST00000540463 467 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC011611.1-201ENST00000552179 197 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC008737.2-201ENST00000599446 118 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 IPO5P1-202ENST00000600039 287 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC115621.1-201ENST00000604653 858 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC104010.1-201ENST00000616889 150 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 ZYXP1-201ENST00000617638 118 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AP004607.9-201ENST00000618202 316 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC134503.1-201ENST00000633048 54 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 DCAF13P1-201ENST00000495256 1330 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC093311.1-201ENST00000506586 2021 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHFRQ96EP1 MTND4P14-201ENST00000435799 1354 ntBASIC4.63□□□□□ -1.67
CHFRQ96EP1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHFRQ96EP1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.63□□□□□ -1.67
CHFRQ96EP1 SCN1A-220ENST00000641603 12506 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 CPHL1P-201ENST00000461341 3407 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AL031985.3-201ENST00000565390 2449 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 Y_RNA.133-201ENST00000363428 110 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 Y_RNA.145-201ENST00000363527 102 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RNU6-1318P-201ENST00000365389 103 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RNA5SP366-201ENST00000365454 123 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 MIR548P-201ENST00000408336 84 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 MIR1284-201ENST00000408337 120 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RNA5SP317-201ENST00000410176 116 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RNA5SP311-201ENST00000411290 116 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RPL23AP26-201ENST00000412728 464 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 SNRPEP10-201ENST00000420249 274 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 EIF4HP2-201ENST00000424380 563 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AL831737.1-201ENST00000441288 271 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 MRPL50P4-201ENST00000446432 475 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AL935212.3-201ENST00000450729 284 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC093278.1-201ENST00000494700 600 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC093677.1-201ENST00000514414 678 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms