Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AL645937.1-201ENST00000641739 1652 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC092104.1-201ENST00000497346 1441 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 RNA5SP167-201ENST00000365461 116 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 SNORA75-201ENST00000384158 137 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 MIR1911-201ENST00000410783 80 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC007899.1-201ENST00000412776 775 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 CDK8P2-201ENST00000415020 547 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 TOMM22P1-201ENST00000418578 312 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC233728.2-201ENST00000425348 757 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AL353777.1-201ENST00000425552 326 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 OR4K11P-201ENST00000431829 904 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 RPEP2-201ENST00000432149 701 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 MTCO3P5-201ENST00000433620 714 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 UBDP1-202ENST00000457888 382 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 SNORD42A-201ENST00000459584 64 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC010285.1-201ENST00000470580 392 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 RNU6-798P-201ENST00000516912 103 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC022616.6-201ENST00000520479 119 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AP002963.1-201ENST00000530590 184 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC009643.1-201ENST00000532030 391 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 RFPL1S-203ENST00000539579 330 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC084783.1-201ENST00000565846 910 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 RPL12P25-202ENST00000598100 674 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC068790.5-201ENST00000602741 355 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC068790.3-201ENST00000602988 553 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC011468.4-201ENST00000603942 409 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AL139286.2-201ENST00000606838 396 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AP000254.1-201ENST00000609934 520 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC131902.3-201ENST00000611767 581 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC100793.4-201ENST00000613683 429 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC026368.1-201ENST00000614934 690 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC009159.1-201ENST00000618386 642 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC009509.4-201ENST00000619202 509 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 RMST_9.1-201ENST00000619945 193 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AL139089.1-201ENST00000620372 975 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC009268.2-201ENST00000621925 457 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AL161637.1-201ENST00000622380 412 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 AC010149.2-201ENST00000637608 315 ntBASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
RAB40AQ8WXH6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 XIAPP3-201ENST00000312918 795 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 SNORA7.2-201ENST00000364446 145 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 Y_RNA.359-201ENST00000365498 102 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 OR5H15-201ENST00000383696 930 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 MIR135A2-201ENST00000384854 100 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 OR6C69P-201ENST00000394268 893 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 CCNG1P1-201ENST00000406783 885 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 AL663109.1-201ENST00000411498 844 ntBASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.8□□□□□ -1.8
RAB40AQ8WXH6 RPL21P112-201ENST00000434403 463 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms