Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC026422.1-201ENST00000623961 452 ntBASIC3.3□□□□□ -1.88
RNF139Q8WU17 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RNF139Q8WU17 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF139Q8WU17 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF139Q8WU17 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF139Q8WU17 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 RPS4XP3-201ENST00000398541 413 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 GSTA8P-201ENST00000404253 637 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 AL024474.1-201ENST00000404655 591 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 AC006960.1-201ENST00000419980 153 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 AL590664.1-201ENST00000448065 339 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 AC093392.2-201ENST00000450682 337 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 NDUFA5P7-201ENST00000452914 242 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 OR5H3P-201ENST00000502817 919 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 AP000790.1-201ENST00000528891 737 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 FAM60BP-201ENST00000578364 658 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF139Q8WU17 GAS5-AS1-201ENST00000602767 694 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 AL020997.3-201ENST00000602843 359 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 PRELID3BP8-201ENST00000604148 295 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
RNF139Q8WU17 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF139Q8WU17 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNF139Q8WU17 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AL589826.1-201ENST00000340697 249 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 RNA5SP383-201ENST00000362934 120 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 RNA5SP374-201ENST00000362939 125 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 RNU6-792P-201ENST00000363490 107 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 RNU6-1027P-201ENST00000383998 107 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 SNORA7.4-201ENST00000384249 137 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 SNORD65C-201ENST00000390962 71 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 RNA5SP38-201ENST00000410750 119 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 RPS15AP38-201ENST00000413110 372 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC108734.1-201ENST00000439549 399 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 AL500527.1-201ENST00000448532 255 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 MTND2P30-201ENST00000456663 382 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC010468.1-201ENST00000461022 817 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 SETP6-201ENST00000479329 568 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC093767.1-201ENST00000504523 156 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC118282.2-201ENST00000508739 374 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC239860.2-201ENST00000525886 270 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 UBL5P2-201ENST00000583788 219 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 SNORD39.3-201ENST00000584451 71 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNF139Q8WU17 AC100793.4-201ENST00000613683 429 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 AL354696.1-201ENST00000614652 497 ntBASIC3.28□□□□□ -1.88
RNF139Q8WU17 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.28□□□□□ -1.88
RNF139Q8WU17 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF139Q8WU17 AC233263.6-201ENST00000631132 1963 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF139Q8WU17 GDI2P1-201ENST00000429312 1336 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF139Q8WU17 U3.11-201ENST00000364476 212 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 SNORA9-201ENST00000384215 133 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 SSXP9-201ENST00000417503 292 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF139Q8WU17 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 MTCO3P43-201ENST00000440974 771 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF139Q8WU17 RPL32P14-201ENST00000463196 378 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 ST13P14-201ENST00000474095 734 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 AC006445.1-201ENST00000491925 405 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 OR10V3P-201ENST00000525712 725 ntBASIC3.27□□□□□ -1.89
RNF139Q8WU17 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF139Q8WU17 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms