Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RPS29P22-201ENST00000472363 168 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 RPL12P20-201ENST00000475538 479 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 RBM43P1-201ENST00000476891 1081 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 RPS26P15-201ENST00000488067 348 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC007686.1-201ENST00000488511 463 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC146944.2-203ENST00000502493 354 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 ARL2BPP6-201ENST00000512757 439 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC139495.1-202ENST00000513164 354 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AP006289.1-201ENST00000538089 277 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC008782.1-201ENST00000603386 430 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC007566.2-201ENST00000603642 413 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC245014.2-201ENST00000603689 287 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC011468.4-201ENST00000603942 409 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC246785.4-201ENST00000605374 287 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 MLECP1-201ENST00000615893 709 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 MIR3688-2-201ENST00000636963 87 ntBASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCHCR1Q8TD31 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 MTND5P33-201ENST00000571250 1450 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC079741.1-201ENST00000321498 212 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 Y_RNA.9-201ENST00000362354 101 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 Y_RNA.234-201ENST00000364409 97 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 Y_RNA.256-201ENST00000364594 104 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 RNU4-12P-201ENST00000365233 139 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 Y_RNA.450-201ENST00000384198 113 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 RNA5SP397-201ENST00000391323 118 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 CALM2P3-201ENST00000400429 449 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AL049697.2-201ENST00000403708 294 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AL359704.1-201ENST00000411586 781 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC069157.1-201ENST00000421749 137 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 ARPC3P1-201ENST00000437218 533 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AL451074.3-201ENST00000437709 472 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC012671.1-201ENST00000451912 203 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 RPS20P32-201ENST00000456044 356 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 RPL38P1-201ENST00000460914 211 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 CDH12P4-201ENST00000517835 295 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 CDH12P3-201ENST00000517935 295 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 CDH12P1-201ENST00000518435 295 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 IGLVIV-53-201ENST00000520107 367 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC022790.1-201ENST00000522872 204 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AP001893.2-201ENST00000526949 202 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC107016.1-201ENST00000550463 337 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC090615.1-201ENST00000577519 154 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC073091.2-201ENST00000603205 907 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC010680.3-201ENST00000604215 520 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 OR10AB1P-201ENST00000609613 938 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 BX664608.1-201ENST00000610519 487 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCHCR1Q8TD31 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.61□□□□□ -1.67
CCHCR1Q8TD31 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCHCR1Q8TD31 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCHCR1Q8TD31 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCHCR1Q8TD31 RNA5SP258-201ENST00000362750 119 ntBASIC4.61□□□□□ -1.67
CCHCR1Q8TD31 RN7SKP44-201ENST00000363602 316 ntBASIC4.61□□□□□ -1.67
CCHCR1Q8TD31 RNVU1-6-201ENST00000364688 164 ntBASIC4.61□□□□□ -1.67
CCHCR1Q8TD31 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms