Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC124068.1-201ENST00000563131 678 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 LARP7P2-201ENST00000575306 125 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 SNORD39.3-201ENST00000584451 71 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AL121992.2-201ENST00000606262 256 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC020634.1-201ENST00000608701 549 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AL355810.1-201ENST00000614629 552 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AL356274.1-201ENST00000617064 410 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHKBP1Q8TBC3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 IRF5P1-201ENST00000504852 2164 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AC121333.1-201ENST00000567488 2709 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 SNORA75B-201ENST00000384053 137 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 Y_RNA.512-201ENST00000384518 102 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 CYB5AP4-201ENST00000396692 399 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AL031663.1-201ENST00000437445 219 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 NOP56P2-201ENST00000447491 769 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 MTND1P17-201ENST00000448961 204 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 GSTA11P-201ENST00000452866 669 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 RPS29P15-201ENST00000458329 171 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 RPS29P22-201ENST00000472363 168 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 RNU6-408P-201ENST00000515910 100 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 Y_RNA.661-201ENST00000516003 99 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 Y_RNA.721-201ENST00000517207 102 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 HIGD1AP5-201ENST00000529959 259 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 OR8R1P-201ENST00000543943 764 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AL137100.2-201ENST00000555786 315 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 RN7SL290P-201ENST00000578661 300 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 MIR3672-201ENST00000584290 82 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AC125336.1-201ENST00000508893 2827 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 AC133552.1-201ENST00000569988 4007 ntBASIC5.39□□□□□ -1.55
SHKBP1Q8TBC3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 Y_RNA.117-201ENST00000363294 101 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 RNA5SP428-201ENST00000365129 132 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 Y_RNA.396-201ENST00000383949 103 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 RNU6-890P-201ENST00000384121 107 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 RNA5SP87-201ENST00000384155 118 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 RNU6-39P-201ENST00000384344 107 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 Y_RNA.496-201ENST00000384444 101 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 RPS4XP9-201ENST00000405151 780 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AL161722.2-201ENST00000434731 981 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 PABPC1P3-201ENST00000469174 459 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 RPL12P20-201ENST00000475538 479 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 RPL23AP41-201ENST00000484754 458 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC079140.5-201ENST00000507882 310 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 RNU6-256P-201ENST00000516747 97 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms