Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RPSAP50-201ENST00000481955 852 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RN7SL97P-201ENST00000486780 299 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AC104806.1-201ENST00000508720 308 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-313P-201ENST00000516317 112 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-1332P-201ENST00000516666 104 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RNU7-4P-201ENST00000516961 62 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AC006600.1-201ENST00000572529 153 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AL390123.1-201ENST00000603216 237 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AC002044.1-201ENST00000606707 158 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AL450472.1-202ENST00000637286 180 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 NXPH1-205ENST00000602349 1953 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 ZNF285B-201ENST00000561698 1767 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AC007159.1-201ENST00000566529 4706 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 BDP1P-201ENST00000582658 1990 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 Y_RNA.54-201ENST00000362766 105 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 SNORD50.1-201ENST00000362987 71 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 Y_RNA.277-201ENST00000364754 102 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-61P-201ENST00000365528 109 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-444P-201ENST00000383988 108 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-1207P-201ENST00000384343 107 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 MIR137-201ENST00000385223 102 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AC005042.1-201ENST00000393397 800 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 RNU2-33P-201ENST00000410344 192 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-387P-201ENST00000411331 105 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 Y_RNA.629-201ENST00000411368 105 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 RPLP0P7-201ENST00000416050 667 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AL590762.4-201ENST00000425885 253 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AC091286.1-201ENST00000431233 461 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AC006967.1-201ENST00000467608 589 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 RPS23P5-201ENST00000495419 428 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 OR51K1P-201ENST00000510214 950 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-202P-201ENST00000515998 96 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 MRPS36P4-201ENST00000534436 298 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 DYNLL1P4-201ENST00000549314 266 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AC026371.1-201ENST00000551867 419 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AC022884.2-201ENST00000578535 580 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 MIR4260-201ENST00000583107 67 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 U2.17-201ENST00000611454 95 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AP001784.1-201ENST00000624107 428 ntBASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NKX2-3Q8TAU0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 MIR411-201ENST00000362239 96 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 Y_RNA.8-201ENST00000362353 102 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 Y_RNA.105-201ENST00000363182 111 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 Y_RNA.199-201ENST00000364014 102 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-225P-201ENST00000384613 103 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-1154P-201ENST00000391001 104 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-121P-201ENST00000410525 99 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 COX6CP10-201ENST00000416832 224 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 AC008280.1-201ENST00000418851 412 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 UBE2D3P2-201ENST00000424409 445 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 AC097713.2-201ENST00000430199 356 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 AL445305.1-201ENST00000432577 575 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 UBE2V1P13-201ENST00000436983 439 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 AL031659.1-201ENST00000447075 539 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 AL450023.1-201ENST00000450868 751 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 RN7SL808P-201ENST00000496066 299 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms