Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 SNRPGP15-201ENST00000600149 222 ntBASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AC106791.2-201ENST00000604680 391 ntBASIC3.08□□□□□ -1.92
BEST4Q8NFU0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AC022149.2-201ENST00000621061 203 ntBASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AP003485.2-201ENST00000623636 610 ntBASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AC009039.2-201ENST00000624524 529 ntBASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AC097655.1-201ENST00000635075 318 ntBASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AL390862.1-201ENST00000635467 1469 ntBASIC3.08□□□□□ -1.92
BEST4Q8NFU0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BEST4Q8NFU0 AC091152.2-201ENST00000591628 2569 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RNU6-931P-201ENST00000363850 107 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 Y_RNA.560-201ENST00000384689 102 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RNU6-821P-201ENST00000390995 107 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RNU6-712P-201ENST00000410558 100 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RNA5SP31-201ENST00000411144 127 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 TPMTP2-201ENST00000414372 726 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC245291.1-201ENST00000419501 328 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC012065.2-201ENST00000421295 375 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC019178.2-201ENST00000423595 505 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC092447.3-201ENST00000426027 686 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 TXNL1P1-201ENST00000429528 554 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 FTH1P1-201ENST00000437933 532 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 MTCYBP31-201ENST00000438855 1122 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 HSPE1P28-201ENST00000443139 211 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AL445669.2-201ENST00000454425 421 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 snoU13.3-201ENST00000459441 104 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RPL31P50-201ENST00000471002 296 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RPS29P22-201ENST00000472363 168 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC006463.2-201ENST00000473326 348 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC017015.1-201ENST00000477387 286 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RPS3AP22-201ENST00000488297 769 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RPL5P23-201ENST00000496040 868 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 KLRA1P-201ENST00000503499 986 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC114967.1-201ENST00000504890 259 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 RNA5SP380-201ENST00000517190 98 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 MRPL49P2-201ENST00000521066 465 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AP006245.1-201ENST00000522549 120 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 OR5D17P-201ENST00000531492 978 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC004024.1-201ENST00000549244 247 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 HSPE1P3-201ENST00000559254 309 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC087481.2-201ENST00000565492 330 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 NIFKP6-201ENST00000598115 845 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC018714.1-201ENST00000605028 208 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AC024560.3-201ENST00000608482 349 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 MIR8058-201ENST00000615737 89 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 MIR6500-201ENST00000622700 86 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AL732618.1-201ENST00000623251 301 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 AP000553.6-201ENST00000641242 118 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 MTND4P34-201ENST00000572715 1371 ntBASIC3.07□□□□□ -1.92
BEST4Q8NFU0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
BEST4Q8NFU0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST4Q8NFU0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST4Q8NFU0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.06□□□□□ -1.92
BEST4Q8NFU0 RPL21P132-201ENST00000331267 462 ntBASIC3.06□□□□□ -1.92
BEST4Q8NFU0 RNU6-600P-201ENST00000362524 99 ntBASIC3.06□□□□□ -1.92
BEST4Q8NFU0 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST4Q8NFU0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.06□□□□□ -1.92
BEST4Q8NFU0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
BEST4Q8NFU0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.06□□□□□ -1.92
BEST4Q8NFU0 AC245052.5-201ENST00000416320 649 ntBASIC3.06□□□□□ -1.92
BEST4Q8NFU0 AL356095.1-201ENST00000417217 199 ntBASIC3.06□□□□□ -1.92
BEST4Q8NFU0 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms