Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.34□□□□□ -1.71
USP38Q8NB14 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
USP38Q8NB14 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
USP38Q8NB14 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.34□□□□□ -1.72
USP38Q8NB14 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
USP38Q8NB14 SAGE4P-201ENST00000442271 3381 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.33□□□□□ -1.72
USP38Q8NB14 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 AL391994.1-201ENST00000254724 282 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 OR5H2-201ENST00000355273 945 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
USP38Q8NB14 RNU1-89P-201ENST00000384592 164 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 RPL7P30-201ENST00000420888 709 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 OFD1P18Y-201ENST00000420889 959 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AL158156.1-201ENST00000422509 473 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AL035407.1-201ENST00000429211 571 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AC087650.1-201ENST00000431445 468 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.33□□□□□ -1.72
USP38Q8NB14 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AL606662.1-201ENST00000445763 553 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.33□□□□□ -1.72
USP38Q8NB14 OR6C5P-201ENST00000452388 923 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 RPS4XP10-201ENST00000465034 731 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 BZW1P2-201ENST00000473537 826 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.33□□□□□ -1.72
USP38Q8NB14 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AC006499.2-201ENST00000513470 337 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.33□□□□□ -1.72
USP38Q8NB14 RNU6-678P-201ENST00000516832 109 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 RN7SKP116-201ENST00000516902 319 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AC022861.1-201ENST00000522981 663 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.33□□□□□ -1.72
USP38Q8NB14 OR6C73P-201ENST00000546432 358 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AC107954.1-201ENST00000565906 727 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.33□□□□□ -1.72
USP38Q8NB14 AL163642.2-201ENST00000604722 1019 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 AL603755.1-201ENST00000619504 163 ntBASIC4.33□□□□□ -1.72
USP38Q8NB14 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USP38Q8NB14 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.33□□□□□ -1.72
USP38Q8NB14 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP38Q8NB14 NUP58P1-201ENST00000502546 1738 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP38Q8NB14 MTCO1P24-201ENST00000515438 1558 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP38Q8NB14 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP38Q8NB14 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.32□□□□□ -1.72
USP38Q8NB14 DCAF13P1-201ENST00000495256 1330 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
USP38Q8NB14 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP38Q8NB14 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
USP38Q8NB14 RNA5SP322-201ENST00000363617 119 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 RNA5SP399-201ENST00000364003 117 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP38Q8NB14 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP38Q8NB14 RNU6-339P-201ENST00000384310 107 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AL031679.1-201ENST00000400616 525 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.32□□□□□ -1.72
USP38Q8NB14 RPS15AP38-201ENST00000413110 372 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AL035423.1-201ENST00000420331 213 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 FNDC3CP-201ENST00000420795 1155 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC012065.2-201ENST00000421295 375 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 MTND1P20-201ENST00000430341 950 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 ATP5HP2-201ENST00000433885 485 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 MTATP6P26-201ENST00000445926 662 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 CYCSP35-201ENST00000451978 304 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 USP9YP34-201ENST00000453983 808 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.32□□□□□ -1.72
USP38Q8NB14 RPS20P24-201ENST00000457473 361 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 RNU7-136P-201ENST00000458819 69 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC146507.1-201ENST00000468335 354 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.32□□□□□ -1.72
USP38Q8NB14 AC106707.2-201ENST00000484182 374 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 RPL7P23-201ENST00000493874 747 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC090453.1-201ENST00000495560 436 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 UBE2CP3-201ENST00000502715 450 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 RNA5SP309-201ENST00000516670 106 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.32□□□□□ -1.72
USP38Q8NB14 OR4R3P-201ENST00000525084 838 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 OR4P1P-201ENST00000530808 1136 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms