Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 RPS20P24-201ENST00000457473 361 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 UBDP1-202ENST00000457888 382 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 HMGB1P25-201ENST00000468402 607 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AP000563.1-201ENST00000490865 758 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AL139099.1-201ENST00000497398 403 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 RNU6-27P-201ENST00000516146 107 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 RNA5SP315-201ENST00000516340 116 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 RN7SKP244-201ENST00000516513 307 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 RNU6-579P-201ENST00000516879 102 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 RNA5SP312-201ENST00000517068 116 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 OR5AK1P-201ENST00000524837 922 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AP004371.1-201ENST00000525240 214 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 DEFB131D-201ENST00000526803 184 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 SYF2P1-201ENST00000550658 413 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 DUXAP6-201ENST00000553858 601 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 MIR3690-201ENST00000580266 75 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AC103881.1-201ENST00000603476 538 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 DPRXP5-201ENST00000604662 539 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AC245297.2-201ENST00000610119 565 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AL139418.1-201ENST00000613613 177 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AC021755.4-201ENST00000616620 456 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 MIR7641-1-201ENST00000627518 61 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC63Q8NA47 AC118273.1-201ENST00000525324 3006 ntBASIC3.54□□□□□ -1.84
CCDC63Q8NA47 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 HMGB1P17-201ENST00000403495 628 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AL139247.1-201ENST00000422768 325 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 RPL23AP74-201ENST00000437246 471 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 RPS24P6-201ENST00000452670 400 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC090453.1-201ENST00000495560 436 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 RPL23AP55-201ENST00000498163 452 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 MTCYBP35-201ENST00000503630 1137 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC114981.1-201ENST00000503897 678 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC010460.1-201ENST00000507087 466 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC026412.2-201ENST00000512270 1075 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC010265.1-201ENST00000513509 211 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 HSPA8P13-201ENST00000523715 472 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 CYCSP2-201ENST00000558168 301 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC012182.1-201ENST00000570133 895 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 VN1R78P-201ENST00000597393 564 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AL592221.1-201ENST00000605266 382 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 TUSC7.1-201ENST00000610969 165 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC087683.2-201ENST00000611384 326 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC009159.2-201ENST00000617603 606 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AP002791.1-201ENST00000623291 381 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 AC091925.2-201ENST00000625059 256 ntBASIC3.53□□□□□ -1.84
CCDC63Q8NA47 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC63Q8NA47 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 OR5BR1P-201ENST00000524992 1330 ntBASIC3.52□□□□□ -1.85
CCDC63Q8NA47 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 MIR372-201ENST00000362225 67 ntBASIC3.52□□□□□ -1.85
CCDC63Q8NA47 RNA5SP295-201ENST00000362655 121 ntBASIC3.52□□□□□ -1.85
CCDC63Q8NA47 RNA5SP258-201ENST00000362750 119 ntBASIC3.52□□□□□ -1.85
CCDC63Q8NA47 RNU6-1214P-201ENST00000363650 109 ntBASIC3.52□□□□□ -1.85
CCDC63Q8NA47 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 PSMA6P3-201ENST00000428242 164 ntBASIC3.52□□□□□ -1.85
CCDC63Q8NA47 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC63Q8NA47 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms