Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CR381572.1-201ENST00000625098 102 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZIC4Q8N9L1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZIC4Q8N9L1 MTND5P31-201ENST00000419366 1374 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC110774.1-201ENST00000623567 2018 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 OR5T3-201ENST00000303059 1023 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 RNA5SP258-201ENST00000362750 119 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 MIR483-201ENST00000385070 76 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 ATF1P1-201ENST00000406040 927 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AL451074.5-201ENST00000415894 435 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.53□□□□□ -2
ZIC4Q8N9L1 RPL21P40-201ENST00000428586 483 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AL390023.1-201ENST00000428836 262 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 SETP8-201ENST00000435341 628 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.53□□□□□ -2
ZIC4Q8N9L1 RPS26P30-201ENST00000443431 335 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 RPL17P49-201ENST00000443728 411 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 RPL7P59-201ENST00000447700 943 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC004022.1-201ENST00000447766 1066 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 NIPA2P5-201ENST00000452282 464 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.53□□□□□ -2
ZIC4Q8N9L1 HMGN2P13-201ENST00000476476 274 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC108729.2-201ENST00000476543 840 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 RN7SL499P-201ENST00000481141 276 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZIC4Q8N9L1 MTCYBP37-201ENST00000510642 1133 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.53□□□□□ -2
ZIC4Q8N9L1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
ZIC4Q8N9L1 CYCSP39-201ENST00000565821 309 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC074051.3-201ENST00000570238 358 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC083760.1-201ENST00000589621 670 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AL450270.1-201ENST00000606160 391 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AL627309.6-201ENST00000606857 840 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC069234.5-201ENST00000611056 416 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AL020991.1-201ENST00000612314 373 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC090116.1-201ENST00000615679 446 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.53□□□□□ -2
ZIC4Q8N9L1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.53□□□□□ -2
ZIC4Q8N9L1 AC073348.1-201ENST00000623002 331 ntBASIC2.53□□□□□ -2
ZIC4Q8N9L1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC092593.1-201ENST00000515413 1815 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 GNG5P1-201ENST00000255500 204 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 SNORA18.3-201ENST00000384122 132 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 MIR512-1-201ENST00000384913 84 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 RNU6-77P-201ENST00000410554 91 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC109780.2-201ENST00000413467 845 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AL158825.1-201ENST00000414735 521 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC233981.1-201ENST00000423224 461 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 ZFAND6P1-201ENST00000434138 605 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 RPS20P5-201ENST00000434808 360 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 RPL21P2-201ENST00000440049 481 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AL691517.1-201ENST00000440833 1235 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 HSPE1P28-201ENST00000443139 211 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AL592437.1-201ENST00000443781 492 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 RPS23P3-201ENST00000470993 430 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC010301.1-201ENST00000473936 355 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AP001025.2-201ENST00000490908 477 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 SNORA31.26-201ENST00000517250 137 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC040174.2-201ENST00000602701 465 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC024153.1-201ENST00000603103 365 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 RMST_10.1-201ENST00000616309 154 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC068831.7-201ENST00000616954 363 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 AC010338.1-201ENST00000621823 717 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZIC4Q8N9L1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 RNU6-1249P-201ENST00000363237 111 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 MIR649-201ENST00000384843 97 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 MIR181A2-201ENST00000384863 110 ntBASIC2.51□□□□□ -2.01
ZIC4Q8N9L1 AL354719.1-201ENST00000406535 843 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms