Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SNORA74.4-201ENST00000607595 199 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC020634.1-201ENST00000608701 549 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC005224.3-201ENST00000584683 2140 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC008627.1-201ENST00000517511 1704 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AL450326.2-201ENST00000421913 1962 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC138393.1-203ENST00000327086 343 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RNA5SP52-201ENST00000362448 134 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-1059P-201ENST00000363752 98 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 Y_RNA.489-201ENST00000384410 101 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 U3.35-201ENST00000408405 208 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RPL21P90-201ENST00000415692 466 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 SYF2P2-201ENST00000417620 583 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 EI24P4-201ENST00000423683 1078 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RPL7P2-201ENST00000427639 268 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 DAP3P1-201ENST00000441522 278 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RN7SL591P-201ENST00000496150 292 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-914P-201ENST00000516749 109 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 TOMM20P1-201ENST00000534518 427 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 BNIP3P5-201ENST00000562290 498 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC109446.1-201ENST00000566172 220 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RN7SL652P-201ENST00000577769 300 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 LRRC37A5P-203ENST00000580181 585 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC027229.1-201ENST00000583887 253 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC093227.2-201ENST00000589357 285 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC020916.2-201ENST00000591242 360 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC025857.2-201ENST00000602711 238 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC005344.1-201ENST00000613391 459 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 AC010325.3-201ENST00000641084 394 ntBASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
DEPDC4Q8N2C3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC010266.2-201ENST00000564741 3255 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 Y_RNA.534-201ENST00000384599 112 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC005522.1-201ENST00000395416 346 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 RN7SKP126-201ENST00000411143 300 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC096921.1-201ENST00000411661 375 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC115283.1-201ENST00000427353 400 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC090804.1-201ENST00000448870 490 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 PCMTD1P1-201ENST00000455560 355 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 RANP2-201ENST00000456833 229 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC108161.1-201ENST00000461060 402 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 RN7SL39P-201ENST00000462264 297 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 RPL9P32-201ENST00000464118 620 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 RN7SL352P-201ENST00000466002 277 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC011005.2-201ENST00000487324 359 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms