Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RPL7P59-201ENST00000447700 943 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 RPL7P31-201ENST00000450192 724 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 AP000797.1-201ENST00000478870 387 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 RNU6-885P-201ENST00000516607 104 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 RNA5SP135-201ENST00000517019 125 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC124068.1-201ENST00000563131 678 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC106782.4-201ENST00000568264 210 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 AP000860.1-201ENST00000605250 559 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC243654.2-201ENST00000612843 443 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC005344.1-201ENST00000613391 459 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC063943.3-201ENST00000615562 356 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC104260.1-201ENST00000616660 539 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 MIR7702-201ENST00000621931 59 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC092326.2-201ENST00000624772 1561 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SYNE4Q8N205 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 AP004289.2-201ENST00000444413 1457 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 RNU6-1300P-201ENST00000391046 108 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 SOD2P1-201ENST00000396543 562 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 HMGN1P14-201ENST00000412459 517 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 BOLA3P4-201ENST00000418151 400 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 MTND3P21-201ENST00000433774 331 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 GDI2P2-201ENST00000445131 608 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SYNE4Q8N205 FDX1P2-201ENST00000450769 375 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 MTCO3P11-201ENST00000455103 774 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 UBDP1-202ENST00000457888 382 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC008628.2-201ENST00000502605 298 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 OR5H5P-201ENST00000503164 928 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 snoU109.6-201ENST00000516831 118 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 SNORA20.3-201ENST00000516880 132 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 GLYCAM1-201ENST00000546596 285 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC138915.2-201ENST00000569776 97 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC006504.3-201ENST00000586818 523 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AL117336.2-201ENST00000602435 335 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC116563.2-201ENST00000624751 535 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 U6.105-201ENST00000637379 88 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SYNE4Q8N205 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 RPS4XP5-202ENST00000449995 1334 ntBASIC4.89□□□□□ -1.63
SYNE4Q8N205 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNE4Q8N205 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SYNE4Q8N205 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 Y_RNA.38-201ENST00000362617 102 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 RNU6-582P-201ENST00000362989 107 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 SNORA51.12-201ENST00000384448 134 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 RPL7P60-201ENST00000397636 735 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 FGF7P8-201ENST00000402994 292 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 RPS29P4-201ENST00000414733 161 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 HMGB3P23-201ENST00000414981 585 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AC234782.4-201ENST00000417646 1048 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AC233728.2-201ENST00000425348 757 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AL512649.1-201ENST00000428997 581 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 PPIAP17-201ENST00000438507 471 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 USP9YP8-201ENST00000441913 500 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 RANP8-201ENST00000444720 713 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 GEMIN8P3-201ENST00000445417 720 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AL034418.1-201ENST00000448675 860 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 RNU6-1218P-201ENST00000458990 108 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 SNORD42A-201ENST00000459584 64 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 RPS3AP17-201ENST00000472594 777 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AC091951.2-201ENST00000500762 203 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms