Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 MTATP6P3-201ENST00000581686 676 ntBASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 AC008521.2-201ENST00000591021 259 ntBASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 AC007684.1-201ENST00000609671 477 ntBASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 AC103710.2-201ENST00000609912 942 ntBASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 MLECP1-201ENST00000615893 709 ntBASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 AL360181.4-201ENST00000621752 134 ntBASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 AC132068.1-201ENST00000623805 459 ntBASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 AC091905.1-201ENST00000624400 311 ntBASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 OR13C1P-202ENST00000641378 2919 ntBASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC28AQ8IWP9 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC28AQ8IWP9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.96□□□□□ -1.77
CCDC28AQ8IWP9 AC092747.4-201ENST00000620519 1861 ntBASIC3.96□□□□□ -1.77
CCDC28AQ8IWP9 AC005832.2-201ENST00000538921 1430 ntBASIC3.96□□□□□ -1.77
CCDC28AQ8IWP9 AC009643.2-201ENST00000603543 1448 ntBASIC3.96□□□□□ -1.77
CCDC28AQ8IWP9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC28AQ8IWP9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 OR4G2P-201ENST00000328113 903 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC007685.1-201ENST00000329806 452 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 RNU6-169P-201ENST00000365336 107 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 RNU6-282P-201ENST00000365357 103 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 RPL17P50-201ENST00000396131 546 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 Z98941.1-201ENST00000407764 100 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 RNA5SP178-201ENST00000410380 128 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 RHEBP3-201ENST00000411920 351 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC093155.2-201ENST00000420734 937 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 EIF1P1-201ENST00000421436 341 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 PPP1R11P2-201ENST00000423543 382 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 MTCO1P39-201ENST00000426148 480 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 DPPA2P1-201ENST00000428060 556 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC079780.1-201ENST00000428259 207 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 TIMM9P3-201ENST00000428659 274 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC068287.1-201ENST00000430283 295 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC002486.1-201ENST00000435098 391 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC064862.4-201ENST00000442180 334 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 RPS11P1-201ENST00000451072 473 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 RNU2-10P-201ENST00000516375 211 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC100870.1-201ENST00000522035 505 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 FAM92A1P1-201ENST00000528023 890 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC105233.3-201ENST00000531125 744 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC027544.3-201ENST00000535082 757 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 FAM60BP-201ENST00000578364 658 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 FO393422.1-201ENST00000603908 708 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC127024.6-201ENST00000621598 424 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AL136313.1-201ENST00000624804 202 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AC116667.1-201ENST00000604855 2072 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 AP001486.2-201ENST00000561652 5113 ntBASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC28AQ8IWP9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC28AQ8IWP9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms