Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 Z95114.1-201ENST00000624264 14574 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC067945.1-201ENST00000342609 618 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 RNA5SP428-201ENST00000365129 132 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AL451142.1-201ENST00000375867 775 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 RNU6-1029P-201ENST00000384109 107 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 MIR135A2-201ENST00000384854 100 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 MIR192-201ENST00000384915 110 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 RPL21P67-201ENST00000402896 478 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC068533.1-201ENST00000418542 415 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 RPS12P23-201ENST00000419579 400 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 RPL35AP12-201ENST00000425362 338 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AL590399.2-201ENST00000427536 309 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 SRIP2-201ENST00000428470 166 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 CALM2P2-201ENST00000428512 440 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AL161722.2-201ENST00000434731 981 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC009220.1-201ENST00000451614 275 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 ASNSP3-201ENST00000451989 1306 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 RN7SL738P-201ENST00000470264 297 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 SNRPCP3-201ENST00000474888 476 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 RN7SL244P-201ENST00000493405 297 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC140172.1-201ENST00000502928 141 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 COX6B1P5-201ENST00000509843 249 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC006427.1-201ENST00000514359 712 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 RN7SKP219-201ENST00000516825 296 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 TRMT10BP1-201ENST00000519377 943 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 BNIP3P1-201ENST00000547295 580 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AL121603.1-201ENST00000553815 142 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC025034.2-201ENST00000623264 286 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 AC110801.1-201ENST00000623590 212 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 OR9K1P-202ENST00000641111 3217 ntBASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.61□□□□□ -1.51
NPAS4Q8IUM7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 Y_RNA.144-201ENST00000363521 113 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 U3.15-201ENST00000365398 212 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 MIR141-201ENST00000384975 95 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AL590139.1-201ENST00000416267 400 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 NCOR1P3-201ENST00000420479 303 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 ERLEC1P1-201ENST00000433806 578 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 RPL34P20-201ENST00000442771 351 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 SNRPFP3-201ENST00000457792 225 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 RPL7L1P8-201ENST00000469911 741 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 RPL7P19-201ENST00000469948 618 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 IGLV2-34-201ENST00000490007 283 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 RN7SKP67-201ENST00000515905 235 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 SNORA19.2-201ENST00000516013 114 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 RNU6-390P-201ENST00000516259 103 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AC005668.1-201ENST00000571142 476 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 MIR4703-201ENST00000577728 79 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 MIR4737-201ENST00000583979 81 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AL031320.1-201ENST00000604177 357 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AC124312.5-201ENST00000604451 268 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 AP001486.3-201ENST00000615334 372 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 MIR6810-201ENST00000622701 70 ntBASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.6□□□□□ -1.51
NPAS4Q8IUM7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms