Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 RNU6-84P-201ENST00000607737 102 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AL451074.6-201ENST00000608512 729 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AP001005.3-201ENST00000622049 129 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 PNPT1P2-201ENST00000456768 2050 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 FRG1BP-201ENST00000278882 761 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 SNORD114-26-201ENST00000363543 72 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AL118520.1-201ENST00000450770 291 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 RPL21P71-201ENST00000465598 459 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC107398.1-201ENST00000486904 505 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 SCARNA16.3-201ENST00000516595 184 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 ELOCP31-201ENST00000540463 467 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC007620.3-201ENST00000608131 497 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC103710.1-201ENST00000610003 901 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC132825.8-201ENST00000640783 297 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 RNU6-707P-201ENST00000364647 95 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AL513175.2-201ENST00000422071 443 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC108078.2-201ENST00000510750 236 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 RAC1P5-201ENST00000512182 576 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 RN7SKP234-201ENST00000517173 224 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 MIR4255-201ENST00000579351 72 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 SNORA4-201ENST00000584302 138 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 Y_RNA.374-201ENST00000365606 101 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 USP9YP6-201ENST00000413550 854 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 USP9YP34-201ENST00000453983 808 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 MIR449C-201ENST00000516047 92 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 MIR337-201ENST00000362281 93 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 RNY1P10-201ENST00000363268 113 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 MIR7153-201ENST00000637758 57 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 MTND4P35-201ENST00000604257 1375 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 DNAJC19P4-201ENST00000440115 345 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AC108479.2-201ENST00000617314 601 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 AP002967.1-201ENST00000624203 539 ntBASIC1.51□□□□□ -2.17
CSMD3Q7Z407 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CSMD3Q7Z407 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 Z73417.1-201ENST00000447373 778 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AC239798.3-201ENST00000454459 408 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 TMEM248P1-201ENST00000510579 951 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AC004520.1-201ENST00000608362 1413 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 RNY1P14-201ENST00000384426 108 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 MIR613-201ENST00000385248 95 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms