Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL049734.2-201ENST00000441066 616 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL512326.1-201ENST00000443050 721 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC009963.2-201ENST00000453431 138 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC019235.1-201ENST00000503847 207 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 NPM1P41-201ENST00000512920 831 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 RN7SKP276-201ENST00000516242 268 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC069240.1-201ENST00000548774 375 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL110118.1-201ENST00000553543 400 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC107954.1-201ENST00000565906 727 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 MIR3118-1-201ENST00000581787 76 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 UBE2L4-201ENST00000587688 464 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL355472.4-201ENST00000610233 626 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL590282.1-201ENST00000610379 1136 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL133173.2-201ENST00000614270 90 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL158801.5-201ENST00000623123 465 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC079597.1-201ENST00000624306 508 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC138649.5-201ENST00000637456 137 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC139769.1-204ENST00000472297 1931 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 OR5J1P-201ENST00000313544 939 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 Y_RNA.548-201ENST00000384656 105 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 MIR93-201ENST00000385024 80 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 MIR513A2-201ENST00000385249 127 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC092642.1-201ENST00000392417 425 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 RPL23AP32-201ENST00000395315 459 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AL109941.1-201ENST00000401925 229 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 RN7SKP235-201ENST00000410662 305 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 RNA5SP104-201ENST00000410989 118 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 RN7SKP100-201ENST00000411258 284 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC004552.1-201ENST00000419089 348 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC019097.1-201ENST00000424783 735 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 FAR2P4-202ENST00000425399 584 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 DPPA2P1-201ENST00000428060 556 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 PSMA2P3-201ENST00000429685 675 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC073464.1-201ENST00000429823 534 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 MTCO2P11-201ENST00000431069 680 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC005154.2-201ENST00000438110 379 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 RPS20P24-201ENST00000457473 361 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 SCARNA10-201ENST00000459255 330 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 RPS26P3-201ENST00000470205 348 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC090543.2-201ENST00000483963 348 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC004057.1-201ENST00000485827 348 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 RPL23AP72-201ENST00000492447 435 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 FAM92A1P2-202ENST00000504766 877 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 HIGD1AP3-201ENST00000515857 278 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 IFITM8P-201ENST00000522529 394 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AP000907.2-201ENST00000530827 353 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AL845331.3-202ENST00000562856 261 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AL356432.3-201ENST00000568952 465 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC099489.2-201ENST00000574976 260 ntBASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.1□□□□□ -1.75
PTCHD4Q6ZW05 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms