Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC010338.1-201ENST00000621823 717 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC024940.5-201ENST00000622889 474 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 CR381572.2-201ENST00000624852 397 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 NEAT1-202ENST00000501122 22743 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 ZNF680P1-201ENST00000436625 1469 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC126323.6-202ENST00000568092 3511 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 Y_RNA.86-201ENST00000363020 111 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 ENSAP1-201ENST00000392855 326 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 OR9R1P-201ENST00000412200 877 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC140076.1-201ENST00000449897 361 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AL356010.1-201ENST00000456364 102 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 COX7A2P2-201ENST00000505291 250 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 SNORD60.2-201ENST00000516883 86 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC105224.1-201ENST00000587055 421 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC098848.2-201ENST00000588023 330 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC011712.1-201ENST00000588959 234 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AL355812.1-201ENST00000603215 216 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 RMST_3.1-201ENST00000611651 109 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 MIR6758-201ENST00000620653 63 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AC099654.10-201ENST00000640395 161 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 MTND5P17-201ENST00000418405 1603 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 AL672167.1-205ENST00000641112 3080 ntBASIC5.37□□□□□ -1.55
RUFY4Q6ZNE9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 XGY1-201ENST00000381172 446 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 RNU6-767P-201ENST00000384132 107 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 RNU6-606P-201ENST00000384721 111 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC114755.2-201ENST00000413520 361 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AL645608.4-201ENST00000423619 154 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 TIMM9P1-201ENST00000436122 256 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC108059.3-201ENST00000456388 214 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 CYCSP34-201ENST00000458172 304 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 RPS4XP10-201ENST00000465034 731 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 HMGB1P21-201ENST00000502313 581 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC022790.1-201ENST00000522872 204 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC011979.2-201ENST00000527568 352 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AL138976.2-201ENST00000563989 694 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 MIR5096-201ENST00000583713 70 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC022726.1-201ENST00000587475 207 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC018638.8-201ENST00000588755 281 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC013553.2-201ENST00000604244 589 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AL159972.1-201ENST00000625150 448 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 SCN1A-220ENST00000641603 12506 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 AC083843.3-201ENST00000623679 2186 ntBASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
RUFY4Q6ZNE9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RUFY4Q6ZNE9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.35□□□□□ -1.55
RUFY4Q6ZNE9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RUFY4Q6ZNE9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RUFY4Q6ZNE9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RUFY4Q6ZNE9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RUFY4Q6ZNE9 SMG1P6-201ENST00000532337 2930 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms