Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 ZNF965P-201ENST00000432501 817 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 MTND4P15-201ENST00000437913 1033 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC112653.1-201ENST00000443851 386 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 OR9N1P-202ENST00000494289 481 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 RPL21P131-201ENST00000497298 483 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 CIR1P1-201ENST00000524055 1133 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AP003168.1-201ENST00000530091 307 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC139103.1-201ENST00000534696 1030 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC024153.1-201ENST00000603103 365 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC008277.2-201ENST00000605196 797 ntBASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMARCD3Q6STE5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 ZNF807-201ENST00000328088 1707 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 RNU6-263P-201ENST00000363811 107 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 FO393413.1-201ENST00000402892 195 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 FO393419.3-201ENST00000428741 282 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 RPS3AP12-201ENST00000443616 753 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 CABYRP1-201ENST00000465493 1045 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AIG1P1-201ENST00000503376 148 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 SETP12-201ENST00000514068 805 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 SNORA74D-201ENST00000516404 141 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 RN7SKP57-201ENST00000517248 293 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 OR4A45P-201ENST00000529954 901 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC009220.3-201ENST00000604318 586 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC004775.1-201ENST00000607389 753 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 VIS1.1-201ENST00000610517 203 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC091948.2-201ENST00000636510 279 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 NSRP1P1-201ENST00000444067 1693 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 MAPK10-266ENST00000641066 6555 ntBASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SMARCD3Q6STE5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AL672167.1-206ENST00000356293 943 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 SNORD21-201ENST00000383953 95 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 RNA5SP38-201ENST00000410750 119 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 RNU4-78P-201ENST00000410940 126 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 UBE2D3P2-201ENST00000424409 445 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 MTATP6P11-201ENST00000428071 670 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 RPL23AP74-201ENST00000437246 471 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AL671855.1-201ENST00000446875 1203 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 ST13P20-201ENST00000447996 1065 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AC015908.1-201ENST00000478739 476 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AC093663.2-201ENST00000484625 313 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 SEM1P1-201ENST00000506694 209 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AC009901.1-201ENST00000506703 541 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AC093014.1-201ENST00000548926 724 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AC135178.6-201ENST00000605314 398 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 HSPE1P14-201ENST00000605812 302 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AC018755.4-201ENST00000619715 454 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 AC024023.1-201ENST00000624530 922 ntBASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
SMARCD3Q6STE5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms