Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC00242Q5T6M2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.85□□□□□ -1.95
LINC00242Q5T6M2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.85□□□□□ -1.95
LINC00242Q5T6M2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC092125.1-201ENST00000562568 1995 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 Y_RNA.51-201ENST00000362725 102 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 Y_RNA.97-201ENST00000363094 102 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RNA5SP322-201ENST00000363617 119 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 Y_RNA.318-201ENST00000365131 97 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL583835.1-201ENST00000399570 407 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL136372.1-201ENST00000403060 228 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RNU4-65P-201ENST00000410473 140 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RN7SKP235-201ENST00000410662 305 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RN7SKP142-201ENST00000411236 328 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RNU6-516P-201ENST00000411381 104 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RPL7AP73-201ENST00000413490 353 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 BTF3L4P1-201ENST00000413813 468 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 TMSB10P2-201ENST00000416049 131 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL389915.1-201ENST00000422463 466 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RPS27AP14-201ENST00000422868 454 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL590762.4-201ENST00000425885 253 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL157831.1-201ENST00000426134 473 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL512649.1-201ENST00000428997 581 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 ATP5HP2-201ENST00000433885 485 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 CDC27P1-201ENST00000445384 715 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 BMI1P1-201ENST00000445879 941 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC098824.1-201ENST00000453565 980 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 SBDSP1-204ENST00000453858 737 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 MTND2P28-201ENST00000457540 1044 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 CEACAMP4-201ENST00000457676 421 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RN7SL610P-201ENST00000463845 291 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RPL21P126-201ENST00000470049 478 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RPS23P3-201ENST00000470993 430 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC116337.2-201ENST00000477662 156 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC108860.1-201ENST00000484521 383 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC105914.1-201ENST00000511798 226 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RN7SKP13-201ENST00000515933 244 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 RNU6-798P-201ENST00000516912 103 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC025881.1-201ENST00000518851 512 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC007115.1-201ENST00000546853 234 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC012414.6-201ENST00000568241 401 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL031985.2-201ENST00000600955 480 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC112187.2-201ENST00000604345 283 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AP002826.1-201ENST00000608835 315 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC012360.2-201ENST00000609349 391 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AC012531.5-201ENST00000611375 151 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 AL161637.1-201ENST00000622380 412 ntBASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
LINC00242Q5T6M2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 AC005832.2-201ENST00000538921 1430 ntBASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.84□□□□□ -1.96
LINC00242Q5T6M2 AC007256.1-201ENST00000392253 2765 ntBASIC2.83□□□□□ -1.96
LINC00242Q5T6M2 AC092326.2-201ENST00000624772 1561 ntBASIC2.83□□□□□ -1.96
LINC00242Q5T6M2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00242Q5T6M2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00242Q5T6M2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms