Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 SNORD21-201ENST00000383953 95 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 RNU2-2P-201ENST00000410396 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 AC007390.1-201ENST00000415722 356 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP188Q5SRE5 SNORD13-201ENST00000459299 104 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.91□□□□□ -1.94
NUP188Q5SRE5 AP003467.2-201ENST00000520175 319 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP188Q5SRE5 AC103710.1-201ENST00000610003 901 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.15-201ENST00000611544 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.16-201ENST00000613119 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.12-201ENST00000613778 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.20-201ENST00000613956 192 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.9-201ENST00000615427 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.11-201ENST00000616345 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.2-201ENST00000616535 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.3-201ENST00000617785 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.19-201ENST00000618602 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 RNU2-1-201ENST00000618664 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.6-201ENST00000619225 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.5-201ENST00000619465 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 U2.10-201ENST00000620268 191 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 MIR219B-201ENST00000637023 88 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.91□□□□□ -1.94
NUP188Q5SRE5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.91□□□□□ -1.94
NUP188Q5SRE5 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.9□□□□□ -1.94
NUP188Q5SRE5 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.9□□□□□ -1.94
NUP188Q5SRE5 AL353729.1-201ENST00000425044 720 ntBASIC2.9□□□□□ -1.94
NUP188Q5SRE5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.9□□□□□ -1.94
NUP188Q5SRE5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.9□□□□□ -1.94
NUP188Q5SRE5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.9□□□□□ -1.94
NUP188Q5SRE5 CEACAMP4-201ENST00000457676 421 ntBASIC2.9□□□□□ -1.94
NUP188Q5SRE5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.9□□□□□ -1.94
NUP188Q5SRE5 XKRY-201ENST00000510392 1100 ntBASIC2.9□□□□□ -1.94
NUP188Q5SRE5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NUP188Q5SRE5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
NUP188Q5SRE5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.9□□□□□ -1.95
NUP188Q5SRE5 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.9□□□□□ -1.95
NUP188Q5SRE5 AL109809.4-201ENST00000603520 2185 ntBASIC2.9□□□□□ -1.95
NUP188Q5SRE5 MIR378A-201ENST00000362177 66 ntBASIC2.9□□□□□ -1.95
NUP188Q5SRE5 SNORA25.9-201ENST00000365087 128 ntBASIC2.9□□□□□ -1.95
NUP188Q5SRE5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.9□□□□□ -1.95
NUP188Q5SRE5 RNU6-178P-201ENST00000384631 104 ntBASIC2.9□□□□□ -1.95
NUP188Q5SRE5 RN7SKP123-201ENST00000410732 291 ntBASIC2.9□□□□□ -1.95
NUP188Q5SRE5 ARF4P2-201ENST00000430209 526 ntBASIC2.9□□□□□ -1.95
NUP188Q5SRE5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.9□□□□□ -1.95
NUP188Q5SRE5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.9□□□□□ -1.95
NUP188Q5SRE5 YWHAEP7-203ENST00000622054 312 ntBASIC2.9□□□□□ -1.95
NUP188Q5SRE5 AC016542.2-201ENST00000624201 619 ntBASIC2.9□□□□□ -1.95
NUP188Q5SRE5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NUP188Q5SRE5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AP005901.5-201ENST00000545779 1796 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 OR5AQ1P-202ENST00000641257 1534 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL139156.1-201ENST00000412785 841 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AP000926.1-201ENST00000479573 241 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 RPL23AP44-201ENST00000482216 473 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.6-201ENST00000603753 252 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.11-201ENST00000604059 253 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.10-201ENST00000604330 253 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AC008162.1-201ENST00000604718 254 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.1-201ENST00000604752 252 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.2-201ENST00000604983 252 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.5-201ENST00000605253 252 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.4-201ENST00000605279 254 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.12-201ENST00000605291 253 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.8-201ENST00000605353 252 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.9-201ENST00000605428 253 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL359821.1-201ENST00000605519 182 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AL670379.7-201ENST00000605823 252 ntBASIC2.89□□□□□ -1.95
NUP188Q5SRE5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NUP188Q5SRE5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 NDUFB4P6-201ENST00000436819 366 ntBASIC2.88□□□□□ -1.95
NUP188Q5SRE5 RN7SKP96-201ENST00000516948 297 ntBASIC2.88□□□□□ -1.95
NUP188Q5SRE5 HMGB1P41-201ENST00000520234 440 ntBASIC2.88□□□□□ -1.95
NUP188Q5SRE5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 AC084035.1-201ENST00000634543 607 ntBASIC2.88□□□□□ -1.95
NUP188Q5SRE5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 RNA5SP270-201ENST00000411361 118 ntBASIC2.88□□□□□ -1.95
NUP188Q5SRE5 NDUFS5P3-201ENST00000450668 321 ntBASIC2.88□□□□□ -1.95
NUP188Q5SRE5 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.88□□□□□ -1.95
NUP188Q5SRE5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP188Q5SRE5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
NUP188Q5SRE5 MIR142-201ENST00000384835 87 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms