Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AMZ2P1-203ENST00000565833 850 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 MIR4776-2-201ENST00000580204 80 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 MIR6886-201ENST00000619864 61 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 MIR4679-1-201ENST00000637619 75 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AL121768.1-201ENST00000613917 2544 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AC110373.1-201ENST00000505994 3505 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RLIMP1-201ENST00000339626 1680 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AC138393.1-203ENST00000327086 343 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 SNORA51.1-201ENST00000363243 140 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 Y_RNA.292-201ENST00000364904 97 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RNU6-658P-201ENST00000384606 106 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RNU6-131P-201ENST00000391144 107 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 Y_RNA.586-201ENST00000391146 98 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RNU6-918P-201ENST00000391219 106 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AC092423.1-201ENST00000430165 186 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AL591704.1-201ENST00000432574 275 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RPL36AP39-201ENST00000445859 318 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AC016027.4-201ENST00000450866 277 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 GEMIN2P1-201ENST00000454246 752 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RPS27AP1-201ENST00000475545 471 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RN7SL717P-201ENST00000478343 297 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 CDH12P4-201ENST00000517835 295 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 CDH12P3-201ENST00000517935 295 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 CDH12P1-201ENST00000518435 295 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 WBP1LP3-201ENST00000523033 208 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AC125612.1-201ENST00000547580 377 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 RPL23AP84-201ENST00000571193 464 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 MIR5701-3-201ENST00000578890 82 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 MIR5701-1-201ENST00000585138 82 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AC034102.8-201ENST00000615146 484 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 MIR5701-2-201ENST00000615634 82 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 uc_338.9-201ENST00000617424 182 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AC074140.1-201ENST00000621617 208 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 AL596275.2-204ENST00000641628 552 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 GNL2P1-201ENST00000451274 2190 ntBASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNFT1Q5M7Z0 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 Y_RNA.44-201ENST00000362676 108 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 SNRPEP6-201ENST00000407465 277 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC093106.2-201ENST00000428212 385 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC007389.2-201ENST00000434630 306 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC114982.1-201ENST00000469402 321 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC010469.2-201ENST00000496412 480 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC074250.1-201ENST00000511117 192 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 RNU6-798P-201ENST00000516912 103 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 RNU6-844P-201ENST00000517175 102 ntBASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.47□□□□□ -1.53
RNFT1Q5M7Z0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms