Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC087312.1-201ENST00000471411 480 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC104982.1-201ENST00000478775 574 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC006483.1-201ENST00000487308 313 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC119751.1-201ENST00000513357 765 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC104057.1-201ENST00000515547 497 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC122134.1-202ENST00000569111 1201 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 SNORD84-203ENST00000584275 78 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC022146.1-201ENST00000595307 847 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 VN1R87P-201ENST00000596706 487 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC113368.1-201ENST00000603736 382 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC002487.1-201ENST00000604565 994 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AF129408.1-201ENST00000608767 431 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AL365361.1-201ENST00000566942 3481 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 RNU6-298P-201ENST00000390888 96 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 RPL7P27-201ENST00000403775 720 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 OR51A3P-201ENST00000413596 924 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 OFD1P18Y-201ENST00000420889 959 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 SFR1P2-201ENST00000421841 730 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AL354692.1-201ENST00000423044 315 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 PTP4A1P7-201ENST00000423476 514 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC236972.1-201ENST00000433225 199 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 SNRPEP4-201ENST00000435815 279 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 CST9LP2-201ENST00000437612 320 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC108734.1-201ENST00000439549 399 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 HMGB3P11-201ENST00000440127 604 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 HMGN3P1-201ENST00000453847 193 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AL389895.1-201ENST00000554127 252 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 BNIP3P27-201ENST00000599991 412 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AL365400.2-201ENST00000605604 902 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AP004247.3-201ENST00000608682 624 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AP000238.1-201ENST00000608759 426 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 RNU6-1192P-201ENST00000612197 107 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 RNU6-489P-201ENST00000618289 107 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC010872.1-201ENST00000624225 675 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC004808.1-201ENST00000627671 721 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC058791.1-201ENST00000608412 3198 ntBASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHROOM1Q2M3G4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SHROOM1Q2M3G4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 SGO1P1-201ENST00000603525 1447 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 EI24P2-201ENST00000397776 1076 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AL031121.1-201ENST00000406553 254 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 RN7SKP220-201ENST00000410611 288 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC127526.1-201ENST00000417526 366 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 RPP40P1-201ENST00000426762 456 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC107083.1-201ENST00000439643 279 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC004801.2-202ENST00000463559 283 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 snoZ278.1-201ENST00000517059 112 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC104417.1-201ENST00000523974 751 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC044913.1-201ENST00000557200 430 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AP001542.2-201ENST00000593141 364 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 BNIP3P11-201ENST00000603878 563 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AP002802.2-201ENST00000605877 235 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms